Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2239 ATGGAACCAAAAGGTGTTCTTATGCAAAGATATGAACTGGGGAGATTATTAGGCCAAGGAACCTTTGCAAAGGTCTATTATGCAAGGAACCTTGTTACGGGCATGAGTGTAGCCATTAAGATAATTGATAAAGAGAAGATTCTGAAAGTTGGGATGATTGATCAAATTAAGAGGGAAATTTCAGTGATGAGACTGGTTAGACATCCACATGTGGTTGAGCTTTATGAGGTGATGGCCACTAAAACCAAGATTTACTTTGTCATGGAGTGCGCAAAAGGTGGTGAACTCTTCCATAAGGTAGCCAAAGGAAAGCTGAAGGAGGATGTTGCTAGGAAATACTTTCAGCAACTGATCAGTGCTGTTGACTACTGCCATAGCAGAGGAGTGTGTCATCGGGATCTAAAACCAGAAAATCTACTATTAGACGAAAATGGGAATTTGAAGGTTTCAGATTTTGGGTTAAGTGCTCTTGCTGAGTCTAAGCACCAAGATGGCTTACTCCATACTACATGTGGTACCCCAGCCTATGTTGCTCCAGAAGTGATAAACAGAAAGGGATATGATGGGTTCAAAGCTGATATATGGTCATGCGGGGTGATCTTGTATGTTTTATTGGCAGGTTATCTTCCATTCCAAAATTCTAATCTGATGGAGATGTATAGGAAGATTGGTAAGGGGGAGTATAAATTTCCTAGCTGGTTTGCACCAGATGTCCGCAGGTTGTTGTCCAAAATCTTGGTTCCTAATCCAAACAAGCGGATATCAATGGCCAAAATTATGGAAAGTTCTTGGTTCAAGAAGGGATTAGAAAAGAATGTTGTTACAGAGACCGAAGAGAAAGAACCAGCACCTTTGGATGCTGATGGCGTATTTGGAGCTTGTGAAAATAACAGTGGTCCTGTTGCAGAAACAAAGCAAGAACTCACCAAACCTCATAATATGAATGCTTTTGATATCATTTCCTTGTCTGCTGGGTTTGACTTGTCTGGTCTGTTTGAGGACATCGATTGCAAGAAAGAGGTGCGGTTTACATCAAACAAGCCCTCCGCAATTATCATCTCCAAATTAGAAGAAATTTGTAAGCGCCTTCGACTGAAAGTGAAGAAGAAAGATGGAGGTTTGTTCAAGCTGGAGGGCTCCACTGAAGGCAGAAAAGGCGCTCTGGGTATAGATGCTGAAATCTTTGAGATCACCCCACTCTTCCATATGGTGGAACTTAAGAAGTCCAGTGGAGACACATTGGAGTACCAGAAGCTTGTGAAAGAGGACATTAGACCAGCACTTAAGGACATAGTTTGGACCTGGCAAGGAGACCAACCTCAGCAACTACAGCAAGAAGTGGTGCTGATGGAGCAACAGCCTTCACATGCTGCCTAG 1377 0.4248 MEPKGVLMQRYELGRLLGQGTFAKVYYARNLVTGMSVAIKIIDKEKILKVGMIDQIKREISVMRLVRHPHVVELYEVMATKTKIYFVMECAKGGELFHKVAKGKLKEDVARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRKGYDGFKADIWSCGVILYVLLAGYLPFQNSNLMEMYRKIGKGEYKFPSWFAPDVRRLLSKILVPNPNKRISMAKIMESSWFKKGLEKNVVTETEEKEPAPLDADGVFGACENNSGPVAETKQELTKPHNMNAFDIISLSAGFDLSGLFEDIDCKKEVRFTSNKPSAIIISKLEEICKRLRLKVKKKDGGLFKLEGSTEGRKGALGIDAEIFEITPLFHMVELKKSSGDTLEYQKLVKEDIRPALKDIVWTWQGDQPQQLQQEVVLMEQQPSHAA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2239 458 Gene3D Phosphorylase Kinase; domain 1 3 90 - -
Prci13g2239 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Prci13g2239 458 FunFam Non-specific serine/threonine protein kinase 309 433 - -
Prci13g2239 458 Pfam NAF domain 311 369 IPR004041 GO:0007165
Prci13g2239 458 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Prci13g2239 458 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Prci13g2239 458 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 430 - -
Prci13g2239 458 FunFam Non-specific serine/threonine protein kinase 2 286 - -
Prci13g2239 458 CDD STKc_SnRK3 10 264 - -
Prci13g2239 458 CDD CIPK_C 315 429 - -
Prci13g2239 458 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2239 458 Gene3D Kinase associated domain 1, KA1 309 434 - -
Prci13g2239 458 SUPERFAMILY Protein kinase-like (PK-like) 7 279 IPR011009 -
Prci13g2239 458 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2239 458 Gene3D Transferase(Phosphotransferase) domain 1 91 293 - -
Prci13g2239 458 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2239 458 FunFam Non-specific serine/threonine protein kinase 3 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2239 Prci-Chr13 37084264 37087067 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2239 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 68.132 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci13g2239 Pkinase 2.7e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2239 K07198 - gmx:100815651 745.347