Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2236 ATGTTTCAAGCTATTCGAGAAATTAACAGGAATATTGCCGATGAAGAAAGAGCATCAGAATCTACTCCTCCGACCAGAGACGAGGAGCCGGAGGGGGTTTTGTTCGGAAAATACGAGATTCGCAAGTTTCTCGGCGTTGGGGGTTTCGCTAAGGTTTACGAAGCTTTCGACGTTGTTACGAAGCAGAGTGTTGCCATTAAGGTCGTGAGCAAGCGCAGGATAGTTGAAGCCCAGCTCACGGCGCAGCTTCAGAGGGAAATTACTATCATGCGCCGGCTGAATCATCCCCATATCGTCAAGCTCTACGAGGTCCTCGCCACCAAGACCAAGATTTACTTCGTCATGGAGTGTGCCCAAGGCGGCGAGCTCTTCGACAGACTTCTTAATCACGGCCTCTTCGACGAAGATCACAACCGTCGGTGTTTCCATCAGTTAATCTCGGCCGTCCGGCATTGTCATTCTCTCGGTGTGTTTCACCGGGATTTGAAGCTCGATAACCTCTTGCTCGACGACGATTTGAACATCAAGGTTTCGGACTTCGGGTTGAGCGCCACAATGGACCAGATCCGACCCGACGGCATGCTGCATACTCTCTGCGGGACCCCTGCTTACTTGACCCCCGAGATGCTCGCCAAGAAAGGCTACGACGGAGAGAAAGTCGACGTGTGGCAGTGCGGTGTCGTTTTGTACGTGCTCACCACCGGGTCTTTGCCGTTCAACGATGCTGACGTGCCGACGATGCTGAGAAGAATCTACCGAGGACGGGTTGGCATCCCCCGATGGGTCCAGCCCGATTTGAAACGGTTGATCAAGCGGTTACTTGACCCGAATCCAAAAACGAGGATTACCGTCGATGAGATTCTGCAGGACCCGTGGTTCAGAAAAGGGTACAGGGAGATCAAAGTCGAGCAGAAGAATTCAGGATGGGAGGAAGACGACAGAAATAGAACCAAGTCCTTGAACGCCTTCCATTTGATATCGTTCTCGTCGGGTTTGGACATGTCGGGTTTGTTCGTTACCGACCCGGAACCTGAAGTTTCGGGCAGCGTGGAACGCATCGTTTCAAAGGAGACGCCGAATAGGATCGTGGAGACGGTGGAGGAGGCGGCCGATCGGGACACAGTGGTGGTGACGAGGAAGGAGGACGGATGGGGAGCGAAGCTTGAGGGGCATAGAGGTAATTTCGTGATATTGATTGGTGTCTACCGGCTAACGGATGAGCTGGTGGTGATTGAGATCAAGAAAAAGGAAAAAGAAGGCGAAAGCGGCGCCCAATTTTGGGACGATAAATTGAGACCTCGAATTTTAGAATTAGAGCATAAACCGGAATAG 1332 0.5195 MFQAIREINRNIADEERASESTPPTRDEEPEGVLFGKYEIRKFLGVGGFAKVYEAFDVVTKQSVAIKVVSKRRIVEAQLTAQLQREITIMRRLNHPHIVKLYEVLATKTKIYFVMECAQGGELFDRLLNHGLFDEDHNRRCFHQLISAVRHCHSLGVFHRDLKLDNLLLDDDLNIKVSDFGLSATMDQIRPDGMLHTLCGTPAYLTPEMLAKKGYDGEKVDVWQCGVVLYVLTTGSLPFNDADVPTMLRRIYRGRVGIPRWVQPDLKRLIKRLLDPNPKTRITVDEILQDPWFRKGYREIKVEQKNSGWEEDDRNRTKSLNAFHLISFSSGLDMSGLFVTDPEPEVSGSVERIVSKETPNRIVETVEEAADRDTVVVTRKEDGWGAKLEGHRGNFVILIGVYRLTDELVVIEIKKKEKEGESGAQFWDDKLRPRILELEHKPE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2236 443 SUPERFAMILY Protein kinase-like (PK-like) 34 307 IPR011009 -
Prci13g2236 443 Gene3D Transferase(Phosphotransferase) domain 1 123 318 - -
Prci13g2236 443 FunFam CAMK family protein kinase 33 329 - -
Prci13g2236 443 SMART serkin_6 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2236 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Prci13g2236 443 ProSiteProfiles NAF domain profile. 315 339 IPR018451 GO:0007165
Prci13g2236 443 CDD CIPK_C 321 433 - -
Prci13g2236 443 Gene3D Phosphorylase Kinase; domain 1 33 122 - -
Prci13g2236 443 Gene3D Kinase associated domain 1, KA1 319 439 - -
Prci13g2236 443 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 29 416 - -
Prci13g2236 443 Pfam NAF domain 318 376 IPR004041 GO:0007165
Prci13g2236 443 Pfam Protein kinase domain 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2236 443 FunFam Aurora kinase A 32 121 - -
Prci13g2236 443 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Prci13g2236 443 ProSiteProfiles Protein kinase domain profile. 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2236 Prci-Chr13 37025173 37026898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2236 33 438 CBL-interacting serine-threonine protein kinases AT2G30360 52.555 5.04e-153 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci13g2236 Pkinase 4.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2236 - K12761 vvi:100260217 477.248