Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2233 ATGAACAAGATGAGATTAGGAGGCGTGGCTCAGATTCATTATGTCGAAAAAGACCCATCTGGACGATATGGACGATTCAGGGATGTTCTGGGGAAAGGGGCGATGAAGATTGTGTATAGAGCATTTGATGAGGTGTTAGGAATGGAAGTGGCTTGGAACCAAGTCAAGCTTGGAGATGTGTTTCATTCCCCAGATGAGCTACAACGCCTTTATTCAGAGGTTCATCTTCTCAAGAACCTTGATCATGACTCTATCATGACCTTCCATGCTTCGTGGATCGATGTCCACCACAGAACCTTCAACTTCATCACTGAACTCTTCACCTCCGGCACGCTTCGAGAGTATAGGCAGAAGTACCATGGAGTCGATATTCGAGCTGTGAAGAACTGGGCTCGTCAAATTCTTAGGGGCTTGGAGTATTTGCACTGCCACGATCCGCCTGTGATACATAGAGACCTCAAGTGTGATAATATCTTTGTCAATGGCCATCTGGGGCAGGTCAAGATTGGCGATTTAGGCTTCGCGGCAATCCTTCGTGGCTCTCAACACGCCCACAGTGTCATAGGTACACCTGAATTTATGGCACCAGAACTGTATGAAGAGGAATACAATGAACTAGTAGATATATACTCCTTTGGGATGTGTATGATAGAGATGCTTACCTCAGAGTTTCCATACAGCGAGTGCTCCAACCCAGCACAAATATACAAGAAAGTCACATCAGGGAAGCTACCAGATGCATTTTACAGAATCCAAGACCTGCAAGCCCAGAGATTTGTGGGAAAATGTTTGGCAAATGTGTCAAAGAGATTGCCGGCAAAGGAACTCTTGTTGGACCCTTTTTTAGCCACGGTCCAACTCGAATCACTGCCGCCACCCTGCCTGCCATTACCAAAGATTCATCAAACTAACAAGTCAAGTTCCAATTCAGTAGCTGCCAAGGTGCATCCTTTCATGGCTGAACAAATAAAGAACACAAACATGACAATAACAGGGACAATGAATGAAGAAGACGACACAGTTTTCCTAAAAGTACAAATTTCTGACAAAAACGGACATGTTAGGAACATATATTTCCCCTTTGACACCATAAATGACACTGCGATGGACGTGGCCATTGAGATGGTGAGGGAATTGGAAATAAGCGACTTGGAGCCATTGGAGATAGCTCAAATGATAGAGGAAGAGATATTAGCTCTGGTTCCAACTTGGAAGGATTGGGGCACTTCTCAGTATCCACGTCAGCACAGCTTTAGATATGAAGAGGAGGAAGATATCAGCAACCACTATCCTTTTTTCTCACCATCTTCTCGATCTTCCTCTCACGGTTCTCCCCCAATGCTTAGCTTCTCTAGCAAGACCCTCTTTGGTGACGACAATAACCATCTCTCACTTGCACAGGATTGGCTTCAAGACGCTTCCTTTCTCGACGATGCAAGCTCAGAAAGCTCTATGAACTCCTTCAAGTATGCGAACATGAATCACTGCGAGCTGGTGGGCGTTGAAGATGAGCATGAAGCAAATTACAAGTGCTCAAGGTTCTGTCCTGCACAAGAGATGGAAGCCAATTACAGTAAGCAGATGAGCTACGGAAGAACAACAGGCTTCTCCTGCAGGAGATGTGGTGATCATCGGCCGGCGAGCCTGACGAGAATGAGGTCATATGTGGATGTGAGGAGCCAGCAGTTGCAGAGATCGTTAATGGAAGAGATACACAAGAGAAGGATGTTCAAGACAGTAGGGGCAATTGAGAACATTGGCTTTCAGGATCCTACATGGAGGTCTGCTTCCTGA 1794 0.4571 MNKMRLGGVAQIHYVEKDPSGRYGRFRDVLGKGAMKIVYRAFDEVLGMEVAWNQVKLGDVFHSPDELQRLYSEVHLLKNLDHDSIMTFHASWIDVHHRTFNFITELFTSGTLREYRQKYHGVDIRAVKNWARQILRGLEYLHCHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGFAAILRGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTSEFPYSECSNPAQIYKKVTSGKLPDAFYRIQDLQAQRFVGKCLANVSKRLPAKELLLDPFLATVQLESLPPPCLPLPKIHQTNKSSSNSVAAKVHPFMAEQIKNTNMTITGTMNEEDDTVFLKVQISDKNGHVRNIYFPFDTINDTAMDVAIEMVRELEISDLEPLEIAQMIEEEILALVPTWKDWGTSQYPRQHSFRYEEEEDISNHYPFFSPSSRSSSHGSPPMLSFSSKTLFGDDNNHLSLAQDWLQDASFLDDASSESSMNSFKYANMNHCELVGVEDEHEANYKCSRFCPAQEMEANYSKQMSYGRTTGFSCRRCGDHRPASLTRMRSYVDVRSQQLQRSLMEEIHKRRMFKTVGAIENIGFQDPTWRSAS 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2233 597 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 503 - -
Prci13g2233 597 SUPERFAMILY Protein kinase-like (PK-like) 26 320 IPR011009 -
Prci13g2233 597 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2233 597 CDD STKc_WNK 22 282 - -
Prci13g2233 597 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Prci13g2233 597 Gene3D Phosphorylase Kinase; domain 1 10 105 - -
Prci13g2233 597 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2233 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Prci13g2233 597 FunFam probable serine/threonine-protein kinase WNK9 107 287 - -
Prci13g2233 597 Gene3D Transferase(Phosphotransferase) domain 1 107 287 - -
Prci13g2233 597 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2233 Prci-Chr13 36962812 36966620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2233 12 425 MAP Kinase Kinase Kinase AT3G51630 69.807 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci13g2233 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2233 K08867 - gmx:100816187 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2233 13 36962812 36966620 Prci13g2233 13 36962812 36966620 ECH