Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2229 ATGGACACAAGTATGACTCTAATAGTTGGTCTTGAATTTGATGATCTAGAAGAGGCATGGCAATATTGGATTGACTATGGTGGAAGAATAGGATTCAGTGTTAGAAAGCAAAACTCTAATAAGAGCAAGAAGGATGATTCTATCATATATTGCAAATATGTTTGTTCCAAGGAGGGAGTGAAAAAAGCAGATAAAAGAGACTTTAAAACTAAGAAGCCTCGAAAGGAAACAAGAACAGGGTGTGAAGTGAAAATGATAATTAAAAAGGTGAATGAAAGATTTAGAGTTAGTGAACTATTTTTGGACCATAATCACCCTTTAGAGCCCCCAGAGACTATTCATTTATTAGCATCACAAAGGAGATTACCGAAAGCACAAGGCTATGCTTTGGAGTTTGCTGAAGATACGGGGATTAAGCAAAAAGCCTCTTTTAATTTAATGAGCAAATATGCAGGAGGGAGGGCTAATTTGGGGTATACCAAAGAGGAGGTAAAGAGTTATCTAAGATCAAGGAGGCAACGAGACATGATCTATGGTGAAGCTGGGTTTTTACTTCGCTATTTTCAACAACAATTGACAAAAAATCCTTCATTTTTTCATGCTTATCAAATGGACTCAGAAGAGCAGATAACTAATGTGTTTTGGGCTGATACACGTATGTTGATAGATTATGATTGTTTTGGGGATGTCATTTCATTTGATACAACATACTCTACAAATCGTGACAACAGACCACTTGCCATTTTCTCAGGTTTCAACCATTACAGAGAAGTAGTGATATTTGGTGCTGCTTTATTATATGATGAGACTATTGAGTCTTTTAAATGGCTTTTTGAAACCTTTTTACAAGCACATAAGCAAAAAATGCCATTTACTATGTTTACTGACCAAGATGCAGCAATGGCAAGAGCCTTAGAAGAAATAATGCCAAATGTAAAGCATGGCTTATGCACATTCCACATCAATAGAAATGGGGTGAAACATCTTGGAAACTTAATGAAAGATGGCTCTCGTTTTCTGGGTGAGTTTAATTGGTGCATGTATCATTGCAAGGAAGAAACAAGGTTTGAGGAATCTTGGAAAGAATTATTATCAAAATATAATGTAGAAGAAAATCCATGGTTGATGTCTATTTACAAGTTAAAAGAAAAATGGGCAGCATGTTACATGAAGTACTCAAAGACTCTTGGTATGAGAAGTACACAACTTAGTGAAAGTATCAATTCATTTATAAAAAGTTGCACTAATCCTGAATTGAATATTAGTCAATTCTTCAATGTCTTTGAACAAGTTGTTGTGGATAAGCGGTATAATGAATTGCAAAGTGACTTCAACTCACGCCAGAAGTTGCCAAGGTTGATATTGAAGAGTTCGTCTATGCTGCAACAGCTTTCTCAAGTTTACACACCACCAATTTTTGACTTGTTCCAGCATGAGTATGACTTACGTGATGCTACGTGTATAAAAGAGAGGAAAGAAAGAAAAATAGCTGCAGATGATGATGCTCTTGTTATTGATTATGTAATCACAATGGTTGATAAAAAAGGAGAGTGGAGATTGACATTTGAGCCATCAAGAGAAGATAAAGAGGCTGTCATTACTTGTAATTGTAAGAAGTTTGAACAATGGGGAATACTATGCTGTCATGCATTGAGGATATTGTATGACCAAGATGTAAAGCTACTTCCAAAGCAATATGTGTTAAAGAGGTGGACAAAAGAAGCAAGGTGTGGTGTAGTGCATGATAGTAAGGGAAAGGAAATTGAAGTTGATCCTAAACTAGAATGCTCGAATCGATATAGGCAATTGTGCCCCATGCTCATAAAATTAGCTAGTGATGCATCTGAATGTTCAGAGGCATTCTCTATGGTTCATCAAGCAGTGCTAGAGCTTAGCAAGAAAGTGTCTCAACTTCTTATTAACCACTCATCAGATAGTGTTAATAATGAAGGAGGTGTTGATGATGATGTTGGTAAGAATGATGGTTCAGGCATTGGATTCAAGAAGAGAGAGCGCAAAAAGATTAGTCCAAGTTGGGTCGACAATCCAAGTCAAAAAAGAAAAAAAGTTAAGACTTTAAAAAAATCTACTAACAAGTCTTCACAATGTTCAAAGGTATAA 2121 0.3593 MDTSMTLIVGLEFDDLEEAWQYWIDYGGRIGFSVRKQNSNKSKKDDSIIYCKYVCSKEGVKKADKRDFKTKKPRKETRTGCEVKMIIKKVNERFRVSELFLDHNHPLEPPETIHLLASQRRLPKAQGYALEFAEDTGIKQKASFNLMSKYAGGRANLGYTKEEVKSYLRSRRQRDMIYGEAGFLLRYFQQQLTKNPSFFHAYQMDSEEQITNVFWADTRMLIDYDCFGDVISFDTTYSTNRDNRPLAIFSGFNHYREVVIFGAALLYDETIESFKWLFETFLQAHKQKMPFTMFTDQDAAMARALEEIMPNVKHGLCTFHINRNGVKHLGNLMKDGSRFLGEFNWCMYHCKEETRFEESWKELLSKYNVEENPWLMSIYKLKEKWAACYMKYSKTLGMRSTQLSESINSFIKSCTNPELNISQFFNVFEQVVVDKRYNELQSDFNSRQKLPRLILKSSSMLQQLSQVYTPPIFDLFQHEYDLRDATCIKERKERKIAADDDALVIDYVITMVDKKGEWRLTFEPSREDKEAVITCNCKKFEQWGILCCHALRILYDQDVKLLPKQYVLKRWTKEARCGVVHDSKGKEIEVDPKLECSNRYRQLCPMLIKLASDASECSEAFSMVHQAVLELSKKVSQLLINHSSDSVNNEGGVDDDVGKNDGSGIGFKKRERKKISPSWVDNPSQKRKKVKTLKKSTNKSSQCSKV 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2229 706 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 636 IPR031052 GO:0006355
Prci13g2229 706 Pfam FAR1 DNA-binding domain 22 108 IPR004330 -
Prci13g2229 706 MobiDBLite consensus disorder prediction 652 677 - -
Prci13g2229 706 ProSiteProfiles Zinc finger SWIM-type profile. 520 558 IPR007527 GO:0008270
Prci13g2229 706 SMART 26again6 533 560 IPR006564 GO:0008270
Prci13g2229 706 MobiDBLite consensus disorder prediction 649 706 - -
Prci13g2229 706 Pfam MULE transposase domain 230 324 IPR018289 -
Prci13g2229 706 Pfam SWIM zinc finger 515 555 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2229 Prci-Chr13 36897857 36899977 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci13g2229 MULE 3.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2229 - - pcin:129316824 1347.41