Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2223 ATGAGGTGCTTCTCTGTCTTGAGAAGTAAGAAGAAAAGGTCTGAACAGATCATCCCTATAAAACATGTCAATCATAAAGAGCATGGAGTAGCAACCATATTGCCCGAACCTCGAACTCATACTAGATCATTGCAGTCTGCACCTCCTAGTTTCAAGACAAGAGTGAAACCCATTCAACCTTGTAATAAAATCACAAAAAATAGAATACGAGCATTATCCGCTCCTTCAACTCTTGATGCAGCAGAACAAGATGCTTTGGTGTCAGTTGAGTATGAGGAACAAGAAGAGTCAAAACACCGAGCTGGATTGATAAAGGAGCAGCGTGTATCCACTTCACAACCCTTACCTCTCCCATCTCCTCAGGGTGGTGGTGCATTGAAGGCTACAGGCAGCTTTAAGTTAGGGACTGTTAGTGGTCCTCTACATGCTTCTGGTCCTCTATATGCTTCTGGACCTTTGCCACTGCCACCTGCTAGTTCCCTACGAAACTTTCCATTCGAGGAAATTGCTTCTGCTTGCCACAATTTCTCTTCAGATCGATTCATGTCAGAAAGTCTTTCTTCTACCATGTATAAAGCTTCCTTTGGTGATGATGTTTCAAGTTCAAAAACTTTTGAAGCTACTGTCACTCGGCTTCACCCTTCTACTCAGGCCCTCAAGGAATTCATAAATGAGGTTAACATTATTGCATCTTTGCAACATCCAAACCTCTGCAAATTGCTAGGTTATCATGCTCGTGAGGGTTCAGAACAGAGAATGTTGGTTTATGAAAGGCTCTTTCATGGAAGCTTGGACCGCTTGTTGTATGGGAGATCTGATGGTCCACCACTTGATTGGAATACAAGAATGAGAATTGCTTTATGTGCTGCCCAAGGTCTTACTTTCTTGCATGAAGAAGGGCCCTTCCAGGCAATGTATAATGAGTTTTCTACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCGGGATATGGTTGTGTTGGACATATTCCTGAAGAAGAGATTCCTAGCAGTTCATCTGCGGTGGGAAACCTATCAGTGGAGACTTTGGAAAGACGATTGCTAACTCCAAAGAGCAACGTTTGGAGCTTTGGCATTTTTCTTCTGGAATTACTGACTGGAAGAAAAAATCTGGATAGCCGTCACCCCAAGGAAGAGAGAAATTTAGTCAAGTGGAGCTGGCCCTTCCTAGCCGACGATTGTCGACTGTCCTTGATCATGGATCCTCAACTGAAAGGTCGCTTTCCTTCCAAAGCAGCAAGGACAATAGCTGATATTGCACTAAGATGCCTTCAAAAGGAGCCATCTGAAAGACCCACCATGAGAACTGTTGTTGAGCATCTGAAAATGGTGCAGGATATGAAGTACTCACTTCGGTTTCCTCTGCAAGAGCCTGCTGCGATTTCTGGAAAACAGATGTCAAGATCACCGAGTCTTAAGATGAGTCTCTCTCCATCACCACAAGTGCCTTCAGGAACACTACCATCTGGTTCACCTCCAAGATGGTCTGGTGGGCCCAACTTGCTTCCATTGCGAGGGTGTTCCTCCATGCTGTCTTTGGATGAGCTTGATCGGCAGTTAAGCCAGAAGTCATCTTCCTCAGCGTCTAGGAGGGCTAGTGTTGTAGGATACTGA 1644 0.4446 MRCFSVLRSKKKRSEQIIPIKHVNHKEHGVATILPEPRTHTRSLQSAPPSFKTRVKPIQPCNKITKNRIRALSAPSTLDAAEQDALVSVEYEEQEESKHRAGLIKEQRVSTSQPLPLPSPQGGGALKATGSFKLGTVSGPLHASGPLYASGPLPLPPASSLRNFPFEEIASACHNFSSDRFMSESLSSTMYKASFGDDVSSSKTFEATVTRLHPSTQALKEFINEVNIIASLQHPNLCKLLGYHAREGSEQRMLVYERLFHGSLDRLLYGRSDGPPLDWNTRMRIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEIPSSSSAVGNLSVETLERRLLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSWPFLADDCRLSLIMDPQLKGRFPSKAARTIADIALRCLQKEPSERPTMRTVVEHLKMVQDMKYSLRFPLQEPAAISGKQMSRSPSLKMSLSPSPQVPSGTLPSGSPPRWSGGPNLLPLRGCSSMLSLDELDRQLSQKSSSSASRRASVVGY 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2223 547 Gene3D Transferase(Phosphotransferase) domain 1 260 463 - -
Prci13g2223 547 Pfam Protein tyrosine and serine/threonine kinase 206 451 IPR001245 GO:0004672|GO:0006468
Prci13g2223 547 Gene3D Phosphorylase Kinase; domain 1 156 257 - -
Prci13g2223 547 ProSiteProfiles Protein kinase domain profile. 176 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2223 547 PANTHER OS01G0588500 PROTEIN-RELATED 101 455 - -
Prci13g2223 547 SUPERFAMILY Protein kinase-like (PK-like) 155 464 IPR011009 -
Prci13g2223 547 MobiDBLite consensus disorder prediction 527 547 - -
Prci13g2223 547 MobiDBLite consensus disorder prediction 472 503 - -
Prci13g2223 547 MobiDBLite consensus disorder prediction 472 513 - -
Prci13g2223 547 MobiDBLite consensus disorder prediction 98 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2223 Prci-Chr13 36835740 36839617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2223 155 455 Receptor kinase-like Gene Family AT4G02010 36.808 1.15e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Prci13g2223 PK_Tyr_Ser-Thr 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2223 - - gmx:100809117 808.52