Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2222 ATGGAACCTGAAGAATTGAGTTTGAAAATGGTGACAAGAACTTGCATGAATGCGGCTTGTGCCACCTCGACGTCGGTTCAGTGGCGGAAAGGATGGGCTCTGCGATCCGGCGAATTCGCCGATCTCTGTGATAAGTGCGGCTCTGCATATGAGCAATCTACATTTTGCTGTGTCTTCCACTCAAAAGATTCTGGCTGGAGGGAATGCACCTCATGTGGCAAGCGTCTTCACTGTGGATGCATTGCTTCTCGGAATTTGCTTGAGCTAATAGATACTGGTGGTGTAAGCTGCATAAATTGTGCGAGAGATTTAGGGCAACCTAGTTCAACCGTTGAAAAGCCTGATGGATTTGGTACATCAAAAGTTGAAATTGGAACTGAACTACAAAGCTCATTGGTTTCTAACCAATTTAAAGGAAGCAATGTTGAGAAAGTGAGAGGGGCACGAGTAGGGGATTATGCAGAGAATGATGGGCTCAGGATTTGGCTTCAAACTCATAATAGTGCTACAAATGCAGTTTCTATGCGATTAAAACAAGAAGCTGTGCCTTTTACTGGGGAACATGGAAGCACTTCGATATCACAATTCCATCCAGAGTCTAATGGATCATCTAAGGCTGTTAAAGTTGACAACTGCAAGACAGATGTAGAAATAAGAGATATGTATGAATCATTTGCTCAAACAAATCTGAGTATGACTCTTGGTGCTCCTTTAGGAAATTCAAACTCATTTCACAATGATGTTTTTGATGAGAGGGAACATAGCAAGACATCATCTTCAACATTACCAGGGCCCAGATCTCGCCATCTCTTACCCAAGCCCCCAAGGTCAACCCTCACCACAGGCTTGGAGGCAAATGCAGGGATGGTATCTCAAATTCGTGTTGCCAGGCCACCTGCTGAAGGACGGGGAAGAAATCAGTTACTCCCCCGTTATTGGCCTAGGATCACTGATCAAGAGTTGCAGCAAATCTCTGGAGATTCAAATTCAATCATTGTGCCATTGTTTGAAAAGATGCTAAGTGCAAGTGATGCTGGTCGAATCGGTCGCTTGGTTCTTCCAAAGGCTTGTGCTGAAGCATATTTTCCTCCTATCTCTCAGCCAGAGGGACTTCCCTTACGAATCCAAGATGTGAAAGGAAAAGAATGGGTATTCCAGTTTAGATTCTGGCCAAACAATAACAGCAGAATGTATGTTCTAGAAGGGGTAACACCCTGCATTCAGTCTATGCAGTTGCAAGCTGGGGATACTGTGACATTTAGTCGTATGGACCCTGAGGGGAAACTTATAATGGGGTTTCGGAAGGCTGCAAATTCTTCTGCAGTGCAGGAACCTCATCCATCTAATATTCCCAATGGCAATCGTTCAAGTGAAACTTCCTACCCTGGTGTTTATGAGAATTTACCTGTATTAAGTGGCTACTCTGGTCTTCTTCAGTCATTAAAAGGAAGTTCGGAAACCCATCTAAATGCACTGTCTAAAAAGTGGAATTCAGCTTGTGGGGACATGAATTGGCATAATATTGAGATGCCTGGAGGCAGGAAGAGAGAAGGAATGCTTCTGCCACCAGCACTGGCTCCAGAGAAGAAAAAGACTCGAAATATTGGGCCAAAAAGTAAGAGATTGCTTATTGACAGCCAGGATGCACTGGAGCTTAAACTAACCTGGGAAGAGGCTCAGGATTTGCTTCGCCCACCACCCTCAGTTAAGCCAAGCATTGTCATGATTGAAGATCATGTATTTGAAGAGTATGAAGAACCTCCTATCTTTGGGAAGAGAAGTATATTTGTTGCCCGGTCAACTGGGATACATGAACAATGGACTCAATGTGATAGTTGCTCAAAATGGCGAAAGTTGCCTGTAGACGTGCTTGTTCCCCCTAAGTGGACATGTGGGGACAATTCATGGGATCAGAGCAGGTGTTCATGTTCTGCTCCCAGTGAACTCACCGCTAGGGAACTAGATAATCTTCTGAGATTAAATAAGGAATTCAAGAAACAGAGAATGGCGGCTGGCCACAGGCTGTCCTTGGAGCGGCATGCATCTTCTGGACTGGATGCTTTGGCTAATGCTGCGATACTCGGAGACGATGCAGGTGACTCTAGCAGGACACCAGTTGCTACCACTACAAAACACCCTCGGCATAGACCTGGCTGCTCCTGCATTGTCTGCATCCAGCCACCTAGTGGAAAGGGAAAACACAAGCCTACATGCACCTGCAATGTATGCATGACAGTTAAACGCCGGTTTAAAACCCTGATGATGCGAAAGAAGAAGCGTCAATCTGAACGTGAAGCAGAGATTGCTCAGAGAAATCAGCAATCGTGTGGACCCAGGGATGAATCGGAAGTAGAAAGTACTTCTAGAAATTTAACTCCAGCTGATGGTTCTGAGACTGAAGCACGGGTACCAAACGAGTTGGAATCAAGAAGTCAAACCGATGTGGCTGAAACCAGCAAGGGACAGTTAGACTTGAACTGCGATCCGGATCGAAATGACATGCAGGCTGGACCCAGCAATGCTAGCATGATGAGTCTACTTCAAGAAGCAAGTCTCCCTCTGGAAACATACCTGAAGCAAAATGGTCTTACTAGCTTAGCATCAGAGCAACAAGCAAATTCAGCTTCCAATGTGCAGGCACAGACAGCTAATGAGAAAGAAGGGAGACATAACGAGGATTGCAGTGCCGCTTCTGACAGAGAGGAGCGAGAAAGCAGCCATGAAGAGAACAGTGGTCAAGACAAAAGCGAAAGTAATCCCCCTTCATGA 2769 0.454 MEPEELSLKMVTRTCMNAACATSTSVQWRKGWALRSGEFADLCDKCGSAYEQSTFCCVFHSKDSGWRECTSCGKRLHCGCIASRNLLELIDTGGVSCINCARDLGQPSSTVEKPDGFGTSKVEIGTELQSSLVSNQFKGSNVEKVRGARVGDYAENDGLRIWLQTHNSATNAVSMRLKQEAVPFTGEHGSTSISQFHPESNGSSKAVKVDNCKTDVEIRDMYESFAQTNLSMTLGAPLGNSNSFHNDVFDEREHSKTSSSTLPGPRSRHLLPKPPRSTLTTGLEANAGMVSQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSIIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKAANSSAVQEPHPSNIPNGNRSSETSYPGVYENLPVLSGYSGLLQSLKGSSETHLNALSKKWNSACGDMNWHNIEMPGGRKREGMLLPPALAPEKKKTRNIGPKSKRLLIDSQDALELKLTWEEAQDLLRPPPSVKPSIVMIEDHVFEEYEEPPIFGKRSIFVARSTGIHEQWTQCDSCSKWRKLPVDVLVPPKWTCGDNSWDQSRCSCSAPSELTARELDNLLRLNKEFKKQRMAAGHRLSLERHASSGLDALANAAILGDDAGDSSRTPVATTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNQQSCGPRDESEVESTSRNLTPADGSETEARVPNELESRSQTDVAETSKGQLDLNCDPDRNDMQAGPSNASMMSLLQEASLPLETYLKQNGLTSLASEQQANSASNVQAQTANEKEGRHNEDCSAASDREERESSHEENSGQDKSESNPPS 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2222 922 MobiDBLite consensus disorder prediction 250 281 - -
Prci13g2222 922 ProSiteProfiles Zinc finger CW-type profile. 601 651 IPR011124 GO:0008270
Prci13g2222 922 CDD B3_DNA 334 435 IPR003340 GO:0003677
Prci13g2222 922 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 12 874 - -
Prci13g2222 922 MobiDBLite consensus disorder prediction 186 207 - -
Prci13g2222 922 MobiDBLite consensus disorder prediction 696 716 - -
Prci13g2222 922 Pfam B3 DNA binding domain 336 435 IPR003340 GO:0003677
Prci13g2222 922 MobiDBLite consensus disorder prediction 754 839 - -
Prci13g2222 922 Gene3D - 314 441 IPR015300 -
Prci13g2222 922 ProSiteProfiles B3 DNA-binding domain profile. 336 437 IPR003340 GO:0003677
Prci13g2222 922 Pfam CW-type Zinc Finger 606 648 IPR011124 GO:0008270
Prci13g2222 922 MobiDBLite consensus disorder prediction 768 795 - -
Prci13g2222 922 MobiDBLite consensus disorder prediction 885 914 - -
Prci13g2222 922 MobiDBLite consensus disorder prediction 868 884 - -
Prci13g2222 922 SUPERFAMILY DNA-binding pseudobarrel domain 334 436 IPR015300 -
Prci13g2222 922 MobiDBLite consensus disorder prediction 868 922 - -
Prci13g2222 922 Gene3D - 604 660 - -
Prci13g2222 922 FunFam B3 domain-containing transcription repressor VAL1 314 441 - -
Prci13g2222 922 SMART B3_2 336 436 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2222 Prci-Chr13 36827649 36834736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2222 13 899 B3 DNA Binding Superfamily AT4G32010 50.168 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci13g2222 B3 2.6e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2222 K09287 - gmx:100778833 1453.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2222 13 36827649 36834736 Prci13g2222 13 36827649 36834736 ECH