Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2221 ATGGAACCTGAAGAATTGAGTTTGAAAATGGTGACAAGAACTTGCATGAATGCGGCTTGTGCCACCTCGACGTCGGTTCAGTGGCGGAAAGGATGGGCTCTGCGATCCGGCGAATTCGCCGATCTCTGTGATAAGTGCGGCTCTGCATATGAGCAATCTACATTTTGCTGTGTCTTCCACTCAAAAGATTCTGGCTGGAGGGAATGCACCTCATGTGGCAAGCGTCTTCACTGTGGATGCATTGCTTCTCGGAATTTGCTTGAGCTAATAGATACTGGTGGTGTAAGCTGCATAAATTGTGCGAGAGATTTAGGGCAACCTAGTTCAACCGTTGAAAAGCCTGATGGATTTGGTACATCAAAAGTTGAAATTGGAACTGAACTACAAAGCTCATTGGTTTCTAACCAATTTAAAGGAAGCAATGTTGAGAAAGTGAGAGGGGCACGAGTAGGGGATTATGCAGAGAATGATGGGCTCAGGATTTGGCTTCAAACTCATAATAGTGCTACAAATGCAGTTTCTATGCGATTAAAACAAGAAGCTGTGCCTTTTACTGGGGAACATGGAAGCACTTCGATATCACAATTCCATCCAGAGTCTAATGGATCATCTAAGGCTGTTAAAGTTGACAACTGCAAGACAGATGTAGAAATAAGAGATATGTATGAATCATTTGCTCAAACAAATCTGAGTATGACTCTTGGTGCTCCTTTAGGAAATTCAAACTCATTTCACAATGATGTTTTTGATGAGAGGGAACATAGCAAGACATCATCTTCAACATTACCAGGGCCCAGATCTCGCCATCTCTTACCCAAGCCCCCAAGGTCAACCCTCACCACAGGCTTGGAGGCAAATGCAGGGATGGTATCTCAAATTCGTGTTGCCAGGCCACCTGCTGAAGGACGGGGAAGAAATCAGTTACTCCCCCGTTATTGGCCTAGGATCACTGATCAAGAGTTGCAGCAAATCTCTGGAGAGATATGTTCAAGTTCAAATTCAATCATTGTGCCATTGTTTGAAAAGATGCTAAGTGCAAGTGATGCTGGTCGAATCGGTCGCTTGGTTCTTCCAAAGGCTTGTGCTGAAGCATATTTTCCTCCTATCTCTCAGCCAGAGGGACTTCCCTTACGAATCCAAGATGTGAAAGGAAAAGAATGGGTATTCCAGTTTAGATTCTGGCCAAACAATAACAGCAGAATGTATGTTCTAGAAGGGGTAACACCCTGCATTCAGTCTATGCAGTTGCAAGCTGGGGATACTGTGACATTTAGTCGTATGGACCCTGAGGGGAAACTTATAATGGGGTTTCGGAAGGCTGCAAATTCTTCTGCAGTGCAGGAACCTCATCCATCTAATATTCCCAATGGCAATCGTTCAAGTGAAACTTCCTACCCTGGTGTTTATGAGAATTTACCTGTATTAAGTGGCTACTCTGGTCTTCTTCAGTCATTAAAAGGAAGTTCGGAAACCCATCTAAATGCACTGTCTAAAAAGTGGAATTCAGCTTGTGGGGACATGAATTGGCATAATATTGAGATGCCTGGAGGCAGGAAGAGAGAAGGAATGCTTCTGCCACCAGCACTGGCTCCAGAGAAGAAAAAGACTCGAAATATTGGGCCAAAAAGTAAGAGATTGCTTATTGACAGCCAGGATGCACTGGAGCTTAAACTAACCTGGGAAGAGGCTCAGGATTTGCTTCGCCCACCACCCTCAGTTAAGCCAAGCATTGTCATGATTGAAGATCATGTATTTGAAGAGTATGAAGAACCTCCTATCTTTGGGAAGAGAAGTATATTTGTTGCCCGGTCAACTGGGATACATGAACAATGGACTCAATGTGATAGTTGCTCAAAATGGCGAAAGTTGCCTGTAGACGTGCTTGTTCCCCCTAAGTGGACATGTGGGGACAATTCATGGGATCAGAGCAGGTGTTCATGTTCTGCTCCCAGTGAACTCACCGCTAGGGAACTAGATAATCTTCTGAGATTAAATAAGGAATTCAAGAAACAGAGAATGGCGGCTGGCCACAGGCTGTCCTTGGAGCGGCATGCATCTTCTGGACTGGATGCTTTGGCTAATGCTGCGATACTCGGAGACGATGCAGGTGACTCTAGCAGGACACCAGTTGCTACCACTACAAAACACCCTCGGCATAGACCTGGCTGCTCCTGCATTGTCTGCATCCAGCCACCTAGTGGAAAGGGAAAACACAAGCCTACATGCACCTGCAATGTATGCATGACAGTTAAACGCCGGTTTAAAACCCTGATGATGCGAAAGAAGAAGCGTCAATCTGAACGTGAAGCAGAGATTGCTCAGAGAAATCAGCAATCGTGTGGACCCAGGGATGAATCGGAAGTAGAAAGTACTTCTAGAAATTTAACTCCAGCTGATGGTTCTGAGACTGAAGCACGGGTACCAAACGAGTTGGAATCAAGAAGTCAAACCGATGTGGCTGAAACCAGCAAGGGACAGTTAGACTTGAACTGCGATCCGGATCGAAATGACATGCAGGCTGGACCCAGCAATGCTAGCATGATGAGTCTACTTCAAGAAGCAAGTCTCCCTCTGGAAACATACCTGAAGCAAAATGGTCTTACTAGCTTAGCATCAGAGCAACAAGCAAATTCAGCTTCCAATGTGCAGGCACAGACAGCTAATGAGAAAGAAGGGAGACATAACGAGGATTGCAGTGCCGCTTCTGACAGAGAGGAGCGAGAAAGCAGCCATGAAGAGAACAGTGGTCAAGACAAAAGCGAAAGTAATCCCCCTTCATGA 2781 0.4534 MEPEELSLKMVTRTCMNAACATSTSVQWRKGWALRSGEFADLCDKCGSAYEQSTFCCVFHSKDSGWRECTSCGKRLHCGCIASRNLLELIDTGGVSCINCARDLGQPSSTVEKPDGFGTSKVEIGTELQSSLVSNQFKGSNVEKVRGARVGDYAENDGLRIWLQTHNSATNAVSMRLKQEAVPFTGEHGSTSISQFHPESNGSSKAVKVDNCKTDVEIRDMYESFAQTNLSMTLGAPLGNSNSFHNDVFDEREHSKTSSSTLPGPRSRHLLPKPPRSTLTTGLEANAGMVSQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGEICSSSNSIIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKAANSSAVQEPHPSNIPNGNRSSETSYPGVYENLPVLSGYSGLLQSLKGSSETHLNALSKKWNSACGDMNWHNIEMPGGRKREGMLLPPALAPEKKKTRNIGPKSKRLLIDSQDALELKLTWEEAQDLLRPPPSVKPSIVMIEDHVFEEYEEPPIFGKRSIFVARSTGIHEQWTQCDSCSKWRKLPVDVLVPPKWTCGDNSWDQSRCSCSAPSELTARELDNLLRLNKEFKKQRMAAGHRLSLERHASSGLDALANAAILGDDAGDSSRTPVATTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNQQSCGPRDESEVESTSRNLTPADGSETEARVPNELESRSQTDVAETSKGQLDLNCDPDRNDMQAGPSNASMMSLLQEASLPLETYLKQNGLTSLASEQQANSASNVQAQTANEKEGRHNEDCSAASDREERESSHEENSGQDKSESNPPS 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2221 926 Gene3D - 314 445 IPR015300 -
Prci13g2221 926 MobiDBLite consensus disorder prediction 250 281 - -
Prci13g2221 926 FunFam B3 domain-containing transcription repressor VAL1 314 445 - -
Prci13g2221 926 CDD B3_DNA 338 439 IPR003340 GO:0003677
Prci13g2221 926 Gene3D - 608 664 - -
Prci13g2221 926 MobiDBLite consensus disorder prediction 186 207 - -
Prci13g2221 926 SMART B3_2 340 440 IPR003340 GO:0003677
Prci13g2221 926 ProSiteProfiles Zinc finger CW-type profile. 605 655 IPR011124 GO:0008270
Prci13g2221 926 MobiDBLite consensus disorder prediction 758 843 - -
Prci13g2221 926 MobiDBLite consensus disorder prediction 700 720 - -
Prci13g2221 926 MobiDBLite consensus disorder prediction 772 799 - -
Prci13g2221 926 Pfam CW-type Zinc Finger 610 652 IPR011124 GO:0008270
Prci13g2221 926 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 12 878 - -
Prci13g2221 926 MobiDBLite consensus disorder prediction 872 888 - -
Prci13g2221 926 MobiDBLite consensus disorder prediction 889 918 - -
Prci13g2221 926 Pfam B3 DNA binding domain 340 439 IPR003340 GO:0003677
Prci13g2221 926 ProSiteProfiles B3 DNA-binding domain profile. 340 441 IPR003340 GO:0003677
Prci13g2221 926 MobiDBLite consensus disorder prediction 872 926 - -
Prci13g2221 926 SUPERFAMILY DNA-binding pseudobarrel domain 338 440 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2221 Prci-Chr13 36827648 36834736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2221 13 903 B3 DNA Binding Superfamily AT4G32010 49.944 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci13g2221 B3 2.6e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2221 K09287 - gmx:100778833 1446.03