Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2220 ATGGTGACAAGAACTTGCATGAATGCGGCTTGTGCCACCTCGACGTCGGTTCAGTGGCGGAAAGGATGGGCTCTGCGATCCGGCGAATTCGCCGATCTCTGTGATAAGTGCGGCTCTGCATATGAGCAATCTACATTTTGCTGTGTCTTCCACTCAAAAGATTCTGGCTGGAGGGAATGCACCTCATGTGGCAAGCGTCTTCACTGTGGATGCATTGCTTCTCGGAATTTGCTTGAGCTAATAGATACTGGTGGTGTAAGCTGCATAAATTGTGCGAGAGATTTAGGGCAACCTAGTTCAACCGTTGAAAAGCCTGATGGATTTGGTACATCAAAAGTTGAAATTGGAACTGAACTACAAAGCTCATTGGTTTCTAACCAATTTAAAGGAAGCAATGTTGAGAAAGTGAGAGGGGCACGAGTAGGGGATTATGCAGAGAATGATGGGCTCAGGATTTGGCTTCAAACTCATAATAGTGCTACAAATGCAGTTTCTATGCGATTAAAACAAGAAGCTGTGCCTTTTACTGGGGAACATGGAAGCACTTCGATATCACAATTCCATCCAGAGTCTAATGGATCATCTAAGGCTGTTAAAGTTGACAACTGCAAGACAGATGTAGAAATAAGAGATATGTATGAATCATTTGCTCAAACAAATCTGAGTATGACTCTTGGTGCTCCTTTAGGAAATTCAAACTCATTTCACAATGATGTTTTTGATGAGAGGGAACATAGCAAGACATCATCTTCAACATTACCAGGGCCCAGATCTCGCCATCTCTTACCCAAGCCCCCAAGGTCAACCCTCACCACAGGCTTGGAGGCAAATGCAGGGATGGTATCTCAAATTCGTGTTGCCAGGCCACCTGCTGAAGGACGGGGAAGAAATCAGTTACTCCCCCGTTATTGGCCTAGGATCACTGATCAAGAGTTGCAGCAAATCTCTGGAGAGATATGTTCAAGTTCAAATTCAATCATTGTGCCATTGTTTGAAAAGATGCTAAGTGCAAGTGATGCTGGTCGAATCGGTCGCTTGGTTCTTCCAAAGGCTTGTGCTGAAGCATATTTTCCTCCTATCTCTCAGCCAGAGGGACTTCCCTTACGAATCCAAGATGTGAAAGGAAAAGAATGGGTATTCCAGTTTAGATTCTGGCCAAACAATAACAGCAGAATGTATGTTCTAGAAGGGGTAACACCCTGCATTCAGTCTATGCAGTTGCAAGCTGGGGATACTGTGACATTTAGTCGTATGGACCCTGAGGGGAAACTTATAATGGGGTTTCGGAAGGCTGCAAATTCTTCTGCAGTGCAGGAACCTCATCCATCTAATATTCCCAATGGCAATCGTTCAAGTGAAACTTCCTACCCTGGTGTTTATGAGAATTTACCTGTATTAAGTGGCTACTCTGGTCTTCTTCAGTCATTAAAAGGAAGTTCGGAAACCCATCTAAATGCACTGTCTAAAAAGTGGAATTCAGCTTGTGGGGACATGAATTGGCATAATATTGAGATGCCTGGAGGCAGGAAGAGAGAAGGAATGCTTCTGCCACCAGCACTGGCTCCAGAGAAGAAAAAGACTCGAAATATTGGGCCAAAAAGTAAGAGATTGCTTATTGACAGCCAGGATGCACTGGAGCTTAAACTAACCTGGGAAGAGGCTCAGGATTTGCTTCGCCCACCACCCTCAGTTAAGCCAAGCATTGTCATGATTGAAGATCATGTATTTGAAGAGTATGAAGAACCTCCTATCTTTGGGAAGAGAAGTATATTTGTTGCCCGGTCAACTGGGATACATGAACAATGGACTCAATGTGATAGTTGCTCAAAATGGCGAAAGTTGCCTGTAGACGTGCTTGTTCCCCCTAAGTGGACATGTGGGGACAATTCATGGGATCAGAGCAGGTGTTCATGTTCTGCTCCCAGTGAACTCACCGCTAGGGAACTAGATAATCTTCTGAGATTAAATAAGGAATTCAAGAAACAGAGAATGGCGGCTGGCCACAGGCTGTCCTTGGAGCGGCATGCATCTTCTGGACTGGATGCTTTGGCTAATGCTGCGATACTCGGAGACGATGCAGGTGACTCTAGCAGGACACCAGTTGCTACCACTACAAAACACCCTCGGCATAGACCTGGCTGCTCCTGCATTGTCTGCATCCAGCCACCTAGTGGAAAGGGAAAACACAAGCCTACATGCACCTGCAATGTATGCATGACAGTTAAACGCCGGTTTAAAACCCTGATGATGCGAAAGAAGAAGCGTCAATCTGAACGTGAAGCAGAGATTGCTCAGAGAAATCAGCAATCGTGTGGACCCAGGGATGAATCGGAAGTAGAAAGTACTTCTAGAAATTTAACTCCAGCTGATGGTTCTGAGACTGAAGCACGGGTACCAAACGAGTTGGAATCAAGAAGTCAAACCGATGTGGCTGAAACCAGCAAGGGACAGTTAGACTTGAACTGCGATCCGGATCGAAATGACATGCAGGCTGGACCCAGCAATGCTAGCATGATGAGTCTACTTCAAGAAGCAAGTCTCCCTCTGGAAACATACCTGAAGCAAAATGGTCTTACTAGCTTAGCATCAGAGCAACAAGCAAATTCAGCTTCCAATGTGCAGGCACAGACAGCTAATGAGAAAGAAGGGAGACATAACGAGGATTGCAGTGCCGCTTCTGACAGAGAGGAGCGAGAAAGCAGCCATGAAGAGAACAGTGGTCAAGACAAAAGCGAAAGTAATCCCCCTTCATGA 2754 0.4546 MVTRTCMNAACATSTSVQWRKGWALRSGEFADLCDKCGSAYEQSTFCCVFHSKDSGWRECTSCGKRLHCGCIASRNLLELIDTGGVSCINCARDLGQPSSTVEKPDGFGTSKVEIGTELQSSLVSNQFKGSNVEKVRGARVGDYAENDGLRIWLQTHNSATNAVSMRLKQEAVPFTGEHGSTSISQFHPESNGSSKAVKVDNCKTDVEIRDMYESFAQTNLSMTLGAPLGNSNSFHNDVFDEREHSKTSSSTLPGPRSRHLLPKPPRSTLTTGLEANAGMVSQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGEICSSSNSIIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKAANSSAVQEPHPSNIPNGNRSSETSYPGVYENLPVLSGYSGLLQSLKGSSETHLNALSKKWNSACGDMNWHNIEMPGGRKREGMLLPPALAPEKKKTRNIGPKSKRLLIDSQDALELKLTWEEAQDLLRPPPSVKPSIVMIEDHVFEEYEEPPIFGKRSIFVARSTGIHEQWTQCDSCSKWRKLPVDVLVPPKWTCGDNSWDQSRCSCSAPSELTARELDNLLRLNKEFKKQRMAAGHRLSLERHASSGLDALANAAILGDDAGDSSRTPVATTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNQQSCGPRDESEVESTSRNLTPADGSETEARVPNELESRSQTDVAETSKGQLDLNCDPDRNDMQAGPSNASMMSLLQEASLPLETYLKQNGLTSLASEQQANSASNVQAQTANEKEGRHNEDCSAASDREERESSHEENSGQDKSESNPPS 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2220 917 MobiDBLite consensus disorder prediction 863 917 - -
Prci13g2220 917 ProSiteProfiles B3 DNA-binding domain profile. 331 432 IPR003340 GO:0003677
Prci13g2220 917 MobiDBLite consensus disorder prediction 691 711 - -
Prci13g2220 917 SUPERFAMILY DNA-binding pseudobarrel domain 329 431 IPR015300 -
Prci13g2220 917 FunFam B3 domain-containing transcription repressor VAL1 305 436 - -
Prci13g2220 917 MobiDBLite consensus disorder prediction 749 834 - -
Prci13g2220 917 MobiDBLite consensus disorder prediction 241 272 - -
Prci13g2220 917 MobiDBLite consensus disorder prediction 763 790 - -
Prci13g2220 917 MobiDBLite consensus disorder prediction 177 198 - -
Prci13g2220 917 Gene3D - 305 436 IPR015300 -
Prci13g2220 917 Pfam CW-type Zinc Finger 601 643 IPR011124 GO:0008270
Prci13g2220 917 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 869 - -
Prci13g2220 917 SMART B3_2 331 431 IPR003340 GO:0003677
Prci13g2220 917 ProSiteProfiles Zinc finger CW-type profile. 596 646 IPR011124 GO:0008270
Prci13g2220 917 Gene3D - 599 655 - -
Prci13g2220 917 Pfam B3 DNA binding domain 331 430 IPR003340 GO:0003677
Prci13g2220 917 CDD B3_DNA 329 430 IPR003340 GO:0003677
Prci13g2220 917 MobiDBLite consensus disorder prediction 863 879 - -
Prci13g2220 917 MobiDBLite consensus disorder prediction 880 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2220 Prci-Chr13 36827648 36834736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2220 4 894 B3 DNA Binding Superfamily AT4G32010 49.944 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci13g2220 B3 2.6e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2220 K09287 - gmx:100778833 1446.03