Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2215 ATGCAATTCGGCTATTTCCTGTTTCTTGTTTTTGCTCCAATCCTCGTTATCTCCGCCGACCCGGCGTTCAACGATGATGTATTGGGGTTGATTGTGTTCAAAGAGGGTCTAAAAGACCCAAAGGCGATGCTCTCTAGTTGGAATGAAGATGACGATAGTCCCTGCAACTGGGTCGGAGTCAAATGTGACCCGACGACCCGTAGGGTCTCTGCTTTAGTACTTGACGGGTTTTCTCTTTCAGGGCATATTGATCGAGGGCTTTTGAGATTGCAGTTTCTTCAAGTTCTTTCACTTTCCAGAAACAACTTCACAGGGACCATAATCCCTGATCTTCCTCGTCTCTGGAATTTGCAACTTGTTGATTTGAGCGAGAACAATCTCTCTGGATCAATCCCACAAGAATTTTTCCAACAATGTGGGTCTTTAAGAGCGGTTTCATTTGCCAGAAACAATCTTTCAGGTAAAATTCCTGATTCTTTAAGCTCTTGCTCTATGTTAGCTACTGTTAACTTCTCCCACAATCAACTTTCTGGAGAATTGCCCTCTGGGATTTGGTATTTGAGGGGATTACAGTCACTTGATCTGTCCAACAATTTGCTGGAGGGAGAGGTTCCTGAGGGAATTGAGAGCTTGAATGATTTAAGAGAGTTAAATCTACAGAAGAATCGATTTATTGGTAGGCTTCCGGAGGGTATTGGAGGTTGCTTGCTCTTGAAATCACTTGATTTTAGTGATAATTTTCTCTCTGGGAGACTTCCTGGCTCAATGCAGAAACTCAGTTCATGCACTCTCAGTTTACAGGGAAATTCATTCACTGGAGGCATTCCTGATTGGATTGGAGAGCTGAAAAATCTGGAGATATTGGACCTTTCTGCAAATGCTTTTTCAGATTGGATTCCCAAATCAATAGGAAATCTTGATTCACTGAATAAATTAAATCTCTCGAGGAATCAACTTACAGGAATTTTGCCTGAGTCAATGGGCAACTGTGTTAAGCTTTTGGCTCTTGACATGAGCCACAATCAGTTATCAGGCCGCATTCCTTCATGGATTTTTAAGATGGGTTTAAAAAGTATTTCACTTACGTGGAACAACTTCACGAGCAATAGTTCTTCGCTTTCATCCACATCGACGTCTTATTATGGCCTCCAGGTTTTGGATTTGTCATCCAATGCATTTTCTGGTGGCCTTCCATCTATTATTGGGGGTCTTAGTAGCTTGCAAGTCTTGAATATGTCCACCAATCATATCTCTGGTGCTATTCCAGTGAGTATAGGAGAGCTTAAATCTTTGTTCATTCTTGACCTAAGTGGCAACAAGATTAATGGAAGCATTCCCTCTGAAATAGAAGGGTTGATTTCACTGAGTGAACTGAGACTGCAGAAGAATTTCCTGAGTGGGAGAATTCCGACCCAAATTGACAAGTGCTCATCCCTGACATCTTTGAATCTTTCTCACAACATGCTCACTGGTTCAATTCCTCCCGCCATTGCGAACCTAGCTAATCTCCAGCACATAGACTTGTCATGGAATGAACTCTCTGGAAGCTTACCAAAGGAGCTGACAAATCTTTCCCACCTTTTCTCCTTTAATGTTTCCTACAACCACCTTCATGGCGAGCTACCAGTGGGTGGCTTCTTCAATACCATCTCTCCCTCATCTGTCTCTGCTAATCCATCGTTATGTGGTTCCATTGTTAATCACTCCTGCCCATCCGTCCATCCCAAACCAATTGTCCTCAACCCAAACTCTTCTGGCTCAAATTCTGGTCCTTCCGCTCAAAACCGTCATCATAAGAAGGTCATTCTCAGTATCTCTGCCCTTATTGCTATTGGAGCTGCTGCTTTTATCACCATTGGTGTGGTGGCTGTTACACTGCTAAATATACATGCACGTCACTCATTGTCACGTTCCGCTGCACCGTTTGCGCTATCTGGTGGTGAAGATTATAGTTGTTCGCCCCAAAATGATCCAAGCTATGGCAAACTTGTAATGTTTACTGGTGATGCTGAATTTTCTGATGGCGCTCATAATCTTCTTAATAAAGACAATGAGATTGGTCGTGGTGGGTTTGGAGTTGTCTATCATACTATTCTCCGAGATGGGCGTTCTGTTGCAATCAAGAAGCTTACAGTCTCTAGTCTGGTCAAGTCCCAAGAAGACTTTGAGAGGGAAGTGAAAACACTTGGGAAGATGAGGCACCATAATCTTGTGGCACTTGAAGGTTACTACTGGACTTCATCCTTGCAGCTCCTGATATATGAGTACCTGTCCAGAGGAAGCTTACATAAGCTTTTACATGATGAAAATGCGAAAGATATCCTATCATGGCGGCAAAGGTTCAAGATTATTCTTGGCATGGCAAAAGGGCTAGCCCATTTGCACCAAATGAACATAATTCACTACAATCTCAAATCAACAAATGTTCTGATTGACTGCTCTGGTGAGCCAAAAATAGGAGATTTTGGCTTGGTGAGGCTATTGCCAATGCTAGACCATTGTGTCTTGAGCAGCAAAATTCAAAGTGCACTCGGTTACATGGCGCCCGAGTTTGCTTGCCGCACAGTGAAGATAACCGAGAAATGTGATCTATACGGGTTTGGGATCCTGGTTCTGGAGGTAGTAACTGGAAAAAGACCTGTGGAATATATGGAGGATGATGTGGTTGTCCTCTGTGACATGGTAAGAGGCGCATTGGAGGAAGGGAAGGTGGAGCAATGTATTGATGCAAAGCTTCTGGGAAATTTTGCTGCAGAAGAAGCAATTCCTGTGATAAAATTAGGGTTAATCTGTGCATCACAAGTGCCATCAAACCGTCCAGACATGGCTGAAGTAATCAACATATTAGAGTTGATACAGTGCCCTTCAGAAGGACAAGAGGAAATCGAATGA 2892 0.4305 MQFGYFLFLVFAPILVISADPAFNDDVLGLIVFKEGLKDPKAMLSSWNEDDDSPCNWVGVKCDPTTRRVSALVLDGFSLSGHIDRGLLRLQFLQVLSLSRNNFTGTIIPDLPRLWNLQLVDLSENNLSGSIPQEFFQQCGSLRAVSFARNNLSGKIPDSLSSCSMLATVNFSHNQLSGELPSGIWYLRGLQSLDLSNNLLEGEVPEGIESLNDLRELNLQKNRFIGRLPEGIGGCLLLKSLDFSDNFLSGRLPGSMQKLSSCTXLSLQGNSFTGGIPDWIGELKNLEILDLSANAFSDWIPKSIGNLDSLNKLNLSRNQLTGILPESMGNCVKLLALDMSHNQLSGRIPSWIFKMGLKSISLTWNNFTSNSSSLSSTSTSYYGLQVLDLSSNAFSGGLPSIIGGLSSLQVLNMSTNHISGAIPVSIGELKSLFILDLSGNKINGSIPSEIEGLISLSELRLQKNFLSGRIPTQIDKCSSLTSLNLSHNMLTGSIPPAIANLANLQHIDLSWNELSGSLPKELTNLSHLFSFNVSYNHLHGELPVGGFFNTISPSSVSANPSLCGSIVNHSCPSVHPKPIVLNPNSSGSNSGPSAQNRHHKKVILSISALIAIGAAAFITIGVVAVTLLNIHARHSLSRSAAPFALSGGEDYSCSPQNDPSYGKLVMFTGDAEFSDGAHNLLNKDNEIGRGGFGVVYHTILRDGRSVAIKKLTVSSLVKSQEDFEREVKTLGKMRHHNLVALEGYYWTSSLQLLIYEYLSRGSLHKLLHDENAKDILSWRQRFKIILGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKIGDFGLVRLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDLYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEQCIDAKLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEEIE 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2215 964 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 758 959 - -
Prci13g2215 964 SMART LRR_sd22_2 429 455 - -
Prci13g2215 964 SMART LRR_sd22_2 187 210 - -
Prci13g2215 964 SMART LRR_sd22_2 501 527 - -
Prci13g2215 964 SMART LRR_sd22_2 283 309 - -
Prci13g2215 964 Gene3D Ribonuclease Inhibitor 301 577 IPR032675 -
Prci13g2215 964 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515
Prci13g2215 964 Gene3D Transferase(Phosphotransferase) domain 1 758 962 - -
Prci13g2215 964 Pfam Protein kinase domain 682 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2215 964 Pfam Leucine rich repeat 455 514 IPR001611 GO:0005515
Prci13g2215 964 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Prci13g2215 964 Pfam Leucine rich repeat 384 442 IPR001611 GO:0005515
Prci13g2215 964 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 675 757 - -
Prci13g2215 964 SUPERFAMILY L domain-like 283 553 - -
Prci13g2215 964 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 24 302 - -
Prci13g2215 964 Gene3D Ribonuclease Inhibitor 23 300 IPR032675 -
Prci13g2215 964 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 324 953 - -
Prci13g2215 964 SUPERFAMILY L domain-like 41 374 - -
Prci13g2215 964 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Prci13g2215 964 SUPERFAMILY Protein kinase-like (PK-like) 681 954 IPR011009 -
Prci13g2215 964 ProSiteProfiles Protein kinase domain profile. 681 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2215 964 Gene3D Phosphorylase Kinase; domain 1 666 757 - -
Prci13g2215 964 SMART LRR_typ_2 211 235 IPR003591 -
Prci13g2215 964 SMART LRR_typ_2 405 427 IPR003591 -
Prci13g2215 964 SMART LRR_typ_2 283 306 IPR003591 -
Prci13g2215 964 SMART LRR_typ_2 525 549 IPR003591 -
Prci13g2215 964 SMART LRR_typ_2 501 524 IPR003591 -
Prci13g2215 964 SMART LRR_typ_2 307 330 IPR003591 -
Prci13g2215 964 SMART LRR_typ_2 429 453 IPR003591 -
Prci13g2215 964 SMART LRR_typ_2 187 210 IPR003591 -
Prci13g2215 964 SMART LRR_typ_2 114 138 IPR003591 -
Prci13g2215 964 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 303 575 - -
Prci13g2215 964 ProSitePatterns Protein kinases ATP-binding region signature. 687 710 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2215 Prci-Chr13 36726305 36730299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2215 7 961 Receptor kinase-like Gene Family AT5G01890 61.435 0.0 1128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Prci13g2215 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2215 - - gmx:100790365 1507.66