Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2207 ATGGAGAATCTGGCAATGAAGGAGCTAGAGAGAGGGCGCGAGTTTGCGAACCAGCTTCGACGATTGATGTTTAGGTCTGAGGAAGAAGCTGATGAGGGTTTAACGACGTCGTCTGCTGAGGATCTTGTGGCCAAAGTGGTGGATTCTTTCACCAACACACTCTCTCTCTTCACCAACAACAATAGCAGTCACCTCTCTCTTCTTCATCATCAAGTTTCTGCAGATTCGTCGTCGTCGTGTTGTCACTTTCCTGATCACTCAGATGAATCTCACGACCAGAGCTTTAAGAGCAGAAGCCCCACAACCACCATTAAAGATCCCAAAAGAAGCTCTCCCAAGAAAAGGAAAAGTACGCATACATGGGAGGAGGATTCCAAAATGAGTCCAAAGGAAGATGGGCATGCATGGAGAAAATATGGCCAAAAAATCATCCTCAATGCTAAATACCCCAGGAACTATTTCAGATGCACTCACAAGTATGATCAAGGATGCCAAGCAACAAAACAAGTTCAGAGAATCCAAGACGATCCTCCTCTGTACAAGACAACCTATTTTGGCCACCACACTTGCACCAACCTCCTCAATCCTCAGATCATTATTGATTCTCCCGACCTTAATTCCACCTCTTCTTGTATCCTCAGCTTCGATAATAATAATAATAATAATAATAATATTACCACCTTTGACCAAAAAGTCAAACCATCCTTCTTAACCCAGCAAAGCCATCTCTTTCTCTCTTCTTCGTCCTCTTTATTTCCATCTGGTGATCCTGTGAAGCAAGAGAAGATTAATGATAATACTGGTCTTCGTCCTTCATGTTCATCCAATGATTGCCAGCTTGTGTATCCTGATTATGATGATGAAGTTCAGCTTCCTTTTGATTCTGAATATAATTATCAAGTGGACGTGTTTACTTCTGCTGGGTTTCGTGATCTTCTTGAATTTGATGATTATGACTCCATTGATGCACATTTGATCCCTAGTTATTTTGAATCTTGTCTTCAACTAGATAAGAGGTAG 1020 0.4167 MENLAMKELERGREFANQLRRLMFRSEEEADEGLTTSSAEDLVAKVVDSFTNTLSLFTNNNSSHLSLLHHQVSADSSSSCCHFPDHSDESHDQSFKSRSPTTTIKDPKRSSPKKRKSTHTWEEDSKMSPKEDGHAWRKYGQKIILNAKYPRNYFRCTHKYDQGCQATKQVQRIQDDPPLYKTTYFGHHTCTNLLNPQIIIDSPDLNSTSSCILSFDNNNNNNNNITTFDQKVKPSFLTQQSHLFLSSSSSLFPSGDPVKQEKINDNTGLRPSCSSNDCQLVYPDYDDEVQLPFDSEYNYQVDVFTSAGFRDLLEFDDYDSIDAHLIPSYFESCLQLDKR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2207 339 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 7 217 IPR044810 GO:0003700
Prci13g2207 339 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2207 339 SUPERFAMILY WRKY DNA-binding domain 126 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2207 339 MobiDBLite consensus disorder prediction 116 133 - -
Prci13g2207 339 Pfam WRKY DNA -binding domain 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2207 339 ProSiteProfiles WRKY domain profile. 125 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g2207 339 Gene3D WRKY domain 115 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g2207 339 MobiDBLite consensus disorder prediction 79 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2207 Prci-Chr13 36656633 36658694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2207 5 209 WRKY Transcription Factor Family AT3G56400 38.356 5.08e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci13g2207 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2207 - - pcin:129291554 622.468