Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2206 ATGAGTCCTGATAAGCCACTGCTTTCAGAATCAAACTGCTCTCTCGGGATTCATCGCCGTTCTCGGAACCCAGGTTCTTTCAGCCGCTATGTCTCCTTCCCGTCTACCATTTTTGACGAAACTCAAAGTGGTGGTTTTGATGTGAAGGACGTAGACTTTGCGTCTGCTGGAGACTCTAGTTTTCGTAGTGCTCTTGAACCTTGCACTTCTGTGATAGAAAAGGACTCACAATCAGTTGATTCTGGGTTTTGCCAGCAGCTACCTTTGGAATGCTCCACTCGGGAGAGGAGGCGCCTGACATCGTGGGGTGCAATGGAACAACATGATATGAATAATAATATTGCGCCATTTGAAATATCAGGTGCTCCATCTCGAGTGCAGGAAAAGAATAAATCACAGAGAATTCGGCATAAAAGTGTGCAATTTGAAGATAACCTCTTACATGATGACAATTCAAGGTCAATATATATCAATGATCCCAAGAAGACAAATGACAAATATGAGTTCACAGGGAATGAGATCAGAACTAGTAAATACACAATCATCACATTCCTGCCTAAGAATCTTTTCATCCAGTTTCATCGGGTTGCTTACTTGTATTTCCTTGCTATTGCGGCTCTAAATCAGCTCCCTCCACTGGCTGTGTTTGGTAGGACTGTGTCTCTTTTTCCCCTCTTGTTTGTTCTCTGTGTCACGGCTATTAAGGATGGTTACGAGGATTGGCGGAGGCACAGGTCAGACCGCAATGAGAACAACCGAGAGTCTTTGGTACTTCAATGCGGTGATTGACCAAAAAAATGGAAGAACATTGAAGTTGGTGAGGTTGTTAAAATCTTAGCCGATGAGACTATACCAGCTGACATGGTGTTATTGGGGACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAACTTGGATGGAGAATCAAATTTAAAGACAAGGTATGCTCGGCAGGAAATGGCTTCAGCAGTATCACCAGATTGTTGTGCTGTTTCTGGGATTATTAGATGTGAGCAACCAAACAGGAATATTTATGAATTCACAGCCAACATGGAGTTCAATGGGCATAGGTTTCCCCTTAGCCAATCAAACATTGTTCTGCGTGGTTGCCAACTGAAGAACACAGATTGGATTATTGGTGTTGTGGTTTATGCAGGGCCGGAAACAAAGGCAATGATGAACAGTGCACCTTCCCCTTCAAAGAGAAGCAGACTGGAGGGTTATATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTCTTTACCATGTGTTTGGTTGTGGCCCTTGGGATGGGTCTTTGGCTGATGCGTCACAAGAACCAGCTTGACACCTTACCGTACTACAGAAAAAGATTCTTCACAAGGGGAGCTGATAATGGAAAAAGATACAGATATTATGGGATACCAATGGAAATCTTTTTCTCATTTTTGAGCTCTATTATAGTTTTCCAGATAATGATACCGATATCACTTTACATAACCATGGAGTTGGTTCGTTTGGGCCAGTCATATTTCATGATTGAGGACAGGGATATGTATGATGCCAACTCTGGATCAAGGTTTCAGTGTAGGTCATTAAATATCAATGAAGATTTGGGTCAAATACGCTATGTGTTTTCAGACAAGACAGGAACACTGACAGAAAATAAGATGGAATTTCGAAGAGCTAGTATACATGGAAGGAATTATGGGAGTTCATTACTTATGGGTGATAATGCAATAGCAGCTGCAGCAGGTAGTGGCAGAGGGAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCAGAACTCATAACACTGTTGCATACAGACTCAGACAGAGATGAAAGGATTGCTGCACATGAATTTTTCCTTACATTGGCCGCTTGTAATACTGTGATCCCTATCCTTAGTTGTGGAACAAGTGAATCAAATGAGGGTGTAAAATGTATTGAATACCAGGGAGAATCTCCCGATGAACAAGCTTTAGTTGCAGCTGCCTCTGCTTATGGATATACTCTTTTTGAGCGGACTTCGGGGCATATTGTTATTGATGTCAATGGTGAGAAACTCAGGTTGGATGTATTGGGTTTGCACGAGTTTGATAGTGTTCGGAAAAGAATGTCTGTTGTTATTCGATTTCCCAACAATACAGTAAAGGTGTTAGTCAAAGGAGCTGATACTTCAATGTTTAGCATCCTGGCTGATGAAATTGACAGCAGTGATAGCATATGGCATGCAACTCAGGGTCATTTGAATGAATATTCTTTGCAAGGTTTACGCACGCTTGTAGTTGCTTCCAGGAATCTCACAGATGCAGAACTTGAGCAATGGCAGAGCATGTATGAAGAAGCAAGCACTTCATTAACTGATAGAGGTGCAAAACTACGCCAAACAGCTGCTCTTATAGAATGCAACTTAAAACTACTTGGAGCAACTGGGATTGAGGATAAGCTGCAAGAGGGTGTGCCAGAAGCGATTGAGTCCTTGCGGCAAGCTGGAATTAAGGTCTGGGTTCTTACTGGTGATAAGCAGGAGACAGCAATTTCAATTGGTCTCTCCTGCAAACTTTTGACTCCAGATATGCAGATGATAATTATAAATGGCACATCAGAAAATGATTGCAGAAATCTTTTGGCTGAAGCTAAAGCCAAATTTGGTGTAAGATCTGTAAGTAAAAGAAACCAGAATATGAGGCACAAAACGAATGATGGACATGGTGATCTTGAGATTGCCAATAACACAAAGTCATTCAATATGCCTAAATGTGATCTAAGGGAAGAAGGAACTAATGCTCCACTGGCACTTGTAATTGATGGGAACAGTTTGGTTTACATATTGGAGAAGGAACAGGAGTCAGAGCTTTTCGACCTTGCAACTTCTTGTAGAGTTGTTCTATGCTGTCGTGTTGCTCCCCTGCAGAAAGCAGGAATTGTTGCTTTGATAAAGAGCCGCACTGTTGATATGACACTGGCTATCGGTGATGGGGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGCCAGGAAGGGCGCCAAGCAGTGATGGCATCTGATTTTGCTATGGGACAGTTTCGATTCCTGAAAAGATTGCTTCTGGTGCATGGACACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTCTACAATTTCTACCGCAATGCTGTCTTTGTATTGATGTTATTCTGGTATATATTATGCACTGCTTTTTCTACGACTTCTGCATTGACAGACTGGAGCAGTGTATTCTATTCTGTGATATACACATCTGTCCCTACTATTGTTGTTGGTATTCTGGACAAAGACTTGAGTCACAAGACACTCTTGGAGCACCCAAAACTTTATGGTGCAGGTCACCGGCATGAGGCGTACAACATGCATTTATTTTGGATCACAATGATTGACACGCTGTGGCAGAGTCTTGTTCTCTTCTACATACCCTTGTTCACATATAAGGATAGCACCATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCCGTTGTTGTCCTTGTAAATGTACATTTGGCCATGGACATTAAGCATTGGGTGTTAATTACACATGTTGCTGTATGGGGATCAATAATCATCACATTTGGTTGCATGGTGGTATTGGATTCTTTCCCTGTCCTTCCCAACTACTGGACTTTTTATCATGTGGCTAAGTCCCCTACATACTGGATCACAATTTTGCTTATAATTATTGTGGCAATGCTCCCTCGATTTGTCTGTAAAGTTGTTTATCAAGTATTTTGGCCGTCGGATATCCAGATAGCTAGAGAAGCTGAGATAATAACAAAACAGCGTGATCATCTGAGGCCAAGGCAGGAAGTTTCTAGTTAA 3849 0.4186 MSPDKPLLSESNCSLGIHRRSRNPGSFSRYVSFPSTIFDETQSGGFDVKDVDFASAGDSSFRSALEPCTSVIEKDSQSVDSGFCQQLPLECSTRERRRLTSWGAMEQHDMNNNIAPFEISGAPSRVQEKNKSQRIRHKSVQFEDNLLHDDNSRSIYINDPKKTNDKYEFTGNEIRTSKYTIITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQCGDFXPKKWKNIEVGEVVKILADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQEMASAVSPDCCAVSGIIRCEQPNRNIYEFTANMEFNGHRFPLSQSNIVLRGCQLKNTDWIIGVVVYAGPETKAMMNSAPSPSKRSRLEGYMNRETLWLSIFLFTMCLVVALGMGLWLMRHKNQLDTLPYYRKRFFTRGADNGKRYRYYGIPMEIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASIHGRNYGSSLLMGDNAIAAAAGSGRGRWKLKSEIAVDSELITLLHTDSDRDERIAAHEFFLTLAACNTVIPILSCGTSESNEGVKCIEYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPNNTVKVLVKGADTSMFSILADEIDSSDSIWHATQGHLNEYSLQGLRTLVVASRNLTDAELEQWQSMYEEASTSLTDRGAKLRQTAALIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTPDMQMIIINGTSENDCRNLLAEAKAKFGVRSVSKRNQNMRHKTNDGHGDLEIANNTKSFNMPKCDLREEGTNAPLALVIDGNSLVYILEKEQESELFDLATSCRVVLCCRVAPLQKAGIVALIKSRTVDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIVVGILDKDLSHKTLLEHPKLYGAGHRHEAYNMHLFWITMIDTLWQSLVLFYIPLFTYKDSTIDIWSMGSLWTIAVVVLVNVHLAMDIKHWVLITHVAVWGSIIITFGCMVVLDSFPVLPNYWTFYHVAKSPTYWITILLIIIVAMLPRFVCKVVYQVFWPSDIQIAREAEIITKQRDHLRPRQEVSS 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2206 1283 ProSitePatterns E1-E2 ATPases phosphorylation site. 544 550 IPR018303 -
Prci13g2206 1283 SFLD p-type atpase 526 1040 IPR044492 -
Prci13g2206 1283 SFLD Haloacid Dehalogenase 526 1040 - -
Prci13g2206 1283 Gene3D - 803 1029 IPR023214 -
Prci13g2206 1283 Pfam Phospholipid-translocating P-type ATPase C-terminal 1017 1257 IPR032630 -
Prci13g2206 1283 NCBIfam phospholipid-translocating P-type ATPase 169 1264 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci13g2206 1283 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 132 1267 - -
Prci13g2206 1283 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 548 819 IPR023299 GO:0000166
Prci13g2206 1283 SUPERFAMILY Calcium ATPase, transduction domain A 253 395 IPR008250 -
Prci13g2206 1283 CDD P-type_ATPase_APLT_Dnf-like 171 1149 - -
Prci13g2206 1283 Gene3D - 643 783 IPR023299 GO:0000166
Prci13g2206 1283 FunFam Phospholipid-transporting ATPase 648 783 - -
Prci13g2206 1283 SUPERFAMILY HAD-like 537 1035 IPR036412 -
Prci13g2206 1283 Gene3D - 228 398 - -
Prci13g2206 1283 FunFam Phospholipid-transporting ATPase 802 1029 - -
Prci13g2206 1283 Pfam E1-E2 ATPase 266 500 - -
Prci13g2206 1283 Pfam Cation transport ATPase (P-type) 652 727 - -
Prci13g2206 1283 NCBIfam HAD-IC family P-type ATPase 959 1075 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci13g2206 1283 NCBIfam HAD-IC family P-type ATPase 474 566 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci13g2206 1283 Pfam Phospholipid-translocating ATPase N-terminal 155 220 IPR032631 -
Prci13g2206 1283 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 1256 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2206 Prci-Chr13 36644503 36654086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2206 132 1273 Primary Pumps ATPases AT5G04930 57.528 0.0 1332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2206 K14802 - gmx:100812459 2026.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2206 13 36644503 36654086 Prci13g2206 13 36644503 36654086 ECH