Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2204 ATGGTTTCCTCTCAGTTTTCTAATTTGTCTAAGACCAGTGTTTGCAAACCATTCCAGAACCAAATACTCTTTCCTGCAAGCCTCACTGACAGTGCAATTACAGATCAAGTTGAGCTTGATTTCTCTGATGTCTTTGGTCCAGTTACAGTGCCTTCTATAGAAGTGAATGATGCTGATTCTGCTATTGTTGAGCATGTGGAAGAATCAAGTGAACTCGTTTACGATGATCCAGCTGTAATTTATACCCGCTCACATTCATTGGTTGGTCCTTCTACTTGTGTTAGCCTATCACTTAAGCTTGGCAAACTCACTTTACATGAAACTGAGGATTCATTAAAAGCAGTGGAGCATGTTGCTGGAGAGACCATTGTAGAAGTTGATGAATCTAATGGCAACAACGTCATCGTTGAGGAGTCTCTTGAAGGTGATAATGAACATCCCATGAAGATCCAGAGAGTGAGCTTTGAAGATTTTGAGATTTTGAAGGTTGTGGGACAGGGAGCATTTGCAAAAGTGTATCAAGTGAGGAAAAAGGTTACTTGTGAAATATTTGCAATGAAGGTAATGAGAAAGGATAAAATTATGGAAAATAACCATGCTGAATACATGAAAGCTGAGAGGGATATTTTAACCAAAATAGAGCACCCCTTTATTGTTCAACTCAGATACTCTTTTCAGACAAAATACAGATTGTATCTTGTGCTGGATTTTGTGAACGGTGGTCATCTCTTCTTTCAGCTTTATCATCAAGGCCTTTTCAGAGAGGATCTAGCACGCATATATGCTGCTGAGATTGTTTCTGCAGTTTCCCATCTCCATGCAAACGGAATAATGCACAGGGATCTAAAACCTGAAAATATCCTGCTGGATGCTGATGGTCATGTTATGCTGACTGATTTTGGCCTGGCCAAGCAATTTGAAAGTAATACAAGATCTAATTCCTTGTGTGGAACAATAGAGTACATGGCACCTGAAATTATTCTTGGCAAGGGCCATGATAAGGCTGCTGATTGGTGGAGTGTTGGAATCCTACTTTATGAAATGCTTACTGGAAAGCCTCCCTTCTGTGGTGGAAACCGTGAGAAAATTCAGCAGAAAATAATTAAAGACAAGATCAAGCTGCCAGCGTTTTTGTCCAGTGAAGCACATTCACTGTTGAAAATGCTGCTGCAGAAGGATGCGACAAAGCGTTTAGGCAGTGGAACAAGGGGTAGCTTGGAAATTAAAGATCACAAGTGGTTCAAACCAATCAATTGGAGGAAGTTGGATTCACGTGAGATCCAGCCAAGCTTTCGCCCTGAAGTTGCTGGAAAGCATTGTGTTGCCAACTTTGAGAAGCGCTGGACTGACATGCCCATCATCGACTCGCCGGCTGCCAGTCCAAATGGTGGCAATCCTTTCAAAGACTTTAGTTATGTGAGACCTGCAGCTTCTTTCCTCCAAAGGAATGGCCCTGCTTGCTAA 1464 0.4173 MVSSQFSNLSKTSVCKPFQNQILFPASLTDSAITDQVELDFSDVFGPVTVPSIEVNDADSAIVEHVEESSELVYDDPAVIYTRSHSLVGPSTCVSLSLKLGKLTLHETEDSLKAVEHVAGETIVEVDESNGNNVIVEESLEGDNEHPMKIQRVSFEDFEILKVVGQGAFAKVYQVRKKVTCEIFAMKVMRKDKIMENNHAEYMKAERDILTKIEHPFIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYAAEIVSAVSHLHANGIMHRDLKPENILLDADGHVMLTDFGLAKQFESNTRSNSLCGTIEYMAPEIILGKGHDKAADWWSVGILLYEMLTGKPPFCGGNREKIQQKIIKDKIKLPAFLSSEAHSLLKMLLQKDATKRLGSGTRGSLEIKDHKWFKPINWRKLDSREIQPSFRPEVAGKHCVANFEKRWTDMPIIDSPAASPNGGNPFKDFSYVRPAASFLQRNGPAC 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2204 487 SMART serkin_6 158 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2204 487 Gene3D Transferase(Phosphotransferase) domain 1 238 433 - -
Prci13g2204 487 SUPERFAMILY Protein kinase-like (PK-like) 155 471 IPR011009 -
Prci13g2204 487 PANTHER RIBOSOMAL PROTEIN S6 KINASE 120 477 - -
Prci13g2204 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Prci13g2204 487 Pfam Protein kinase domain 158 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2204 487 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524
Prci13g2204 487 Gene3D Phosphorylase Kinase; domain 1 156 454 - -
Prci13g2204 487 CDD STKc_AGC 164 414 IPR045270 GO:0004674|GO:0005524
Prci13g2204 487 ProSiteProfiles Protein kinase domain profile. 158 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2204 487 FunFam Non-specific serine/threonine protein kinase 238 433 - -
Prci13g2204 487 SMART pkinase_C_6 415 474 IPR000961 GO:0004674|GO:0005524|GO:0006468
Prci13g2204 487 FunFam Non-specific serine/threonine protein kinase 155 261 - -
Prci13g2204 487 ProSiteProfiles AGC-kinase C-terminal domain profile. 415 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2204 Prci-Chr13 36613916 36618612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2204 1 482 AGC Kinase Gene Family AT3G08720 68.172 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Prci13g2204 Pkinase 1.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2204 K04688 - gmx:100805922 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2204 13 36613916 36618612 Prci13g2204 13 36613916 36618612 ECH