Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2202 ATGGCTTCCTTGCTTCGTCCTCCTGCTTATGCCCTCCAACATAATCTAACCACAATCCCCTTCTCTTCTCCGAAACCCACTTCACCCAATAATGTTTCTTTCTTAACACACCGTTTCAAGAGTAACCCTGTAAAGTGTAAAGCTTTTCTGGACAACATTGCCAACGATTTGTTGGAGAACACTATATACCTCGATCAATTCCCTGTTCTTCGATCAGGAATAGTTCAATTTCAGAGATTAACTGAAGATTTATCCGATTTCCAGAAGTGGTGTTTCCTTGTTTTTGCAGGACTGACATGGATTTATTTGACTGCAAGGCCAGGTGTTCTTATAGGCGCCATTGATGCCTACCTTCTGGCTCCTCTGCAGCTCGGCTTGGACAATTTAACGGGAAAAAGGAATCTCAGAAGGACTGATTTTATGATTGGAGATAAGATTGGGGAAGGTTCATTTGGTGTTGTTTATTCTGGTGTCGTGGTTCCGAAGAATGGTTTTGTTGAAGAGAATGTACAGAAGAGGGGAAGAGGAAAGACAGCAATAAATTTGAATGTGAAACCAAAGGATAAAGTTATTCTCAAAAAGGTGAAGGTTGGAATCGTAGGGGCCGAACAATTCGGTGACTTTGAGGAGTGGTTCAATTACAGGCTTTCCAGAGCAGCTCCTGAAACTTGTGCTGAATTCCTGGGAAGTTTTGTAGCTGATAGAACAAATTCACAATTCATAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGACCGCACTCTTGCTGATTACATCAAAGGTCGTAACTTTCCTTCAAACTTAGAGTCTGTCATGTTTGGAAGTGTCTTGCAAGGTGTAGACCCTTCTAAACGAAATGCATTGATCATCAAACAAATAATGCGCCAGATTATCACATGTCTTAAGAAAATTCACGACACAGGCATTGTTCACAGAGATGTCAAGCCTGCCAACTTGGTAGTCACTAGACGGGGGCAGATTAAACTCATAGATTTTGGTGCAGCAGCAGACCTTCGAATTGGAAAGAATTATGTACCCAACATTACCTTGCTGGATCCTGACTACTGCCCCCCAGAATTATATGTACTCCCGGAAGAAACACCGAGTCCTCCTCCAGAGCCAATTGCAGCTTTCCTTTCACCAATCTTGTGGCAGCTGAATAGTCCTGATCTGTTTGATACGTACTCTGCTGGGATTGTACTCCTGCAAATGGCAATACCATCTTTAAGGTCTCCAGCTGCCTTGAAGAACTTCAATTTGGAGATCAAAACATGTCAATATGATTTGATCAAATGGAGAGAATTTACTCGCCTTAGGCCCGACTTCCAAATTCTTGACTGTGACTCAGGTCGAGGGTGGGACTTAGCAACAAAGCTTATTTGTGAGAGAGGCCCCTTTAGAAGAGGACGCTTATCTGCTGCAGATGCTTTGAGGCATCCTTATTTTCTTCTGGCTGGTGATCAAGCTGCCGCAGTCCTTTCAAAATTGAGCTTAAGCAGAAAGTGA 1512 0.4286 MASLLRPPAYALQHNLTTIPFSSPKPTSPNNVSFLTHRFKSNPVKCKAFLDNIANDLLENTIYLDQFPVLRSGIVQFQRLTEDLSDFQKWCFLVFAGLTWIYLTARPGVLIGAIDAYLLAPLQLGLDNLTGKRNLRRTDFMIGDKIGEGSFGVVYSGVVVPKNGFVEENVQKRGRGKTAINLNVKPKDKVILKKVKVGIVGAEQFGDFEEWFNYRLSRAAPETCAEFLGSFVADRTNSQFIKGGKWLVWKFEGDRTLADYIKGRNFPSNLESVMFGSVLQGVDPSKRNALIIKQIMRQIITCLKKIHDTGIVHRDVKPANLVVTRRGQIKLIDFGAAADLRIGKNYVPNITLLDPDYCPPELYVLPEETPSPPPEPIAAFLSPILWQLNSPDLFDTYSAGIVLLQMAIPSLRSPAALKNFNLEIKTCQYDLIKWREFTRLRPDFQILDCDSGRGWDLATKLICERGPFRRGRLSAADALRHPYFLLAGDQAAAVLSKLSLSRK 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2202 503 Pfam Protein kinase domain 291 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2202 503 SMART serkin_6 140 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2202 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Prci13g2202 503 Gene3D Phosphorylase Kinase; domain 1 127 251 - -
Prci13g2202 503 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 51 503 - -
Prci13g2202 503 Gene3D Transferase(Phosphotransferase) domain 1 283 487 - -
Prci13g2202 503 SUPERFAMILY Protein kinase-like (PK-like) 137 485 IPR011009 -
Prci13g2202 503 ProSiteProfiles Protein kinase domain profile. 140 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2202 Prci-Chr13 36609429 36612592 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2202 140 340 MAP Kinase Kinase Kinase AT3G13530 24.510 1.08e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Prci13g2202 Pkinase 8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2202 - - qsa:O6P43_016456 782.711