Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2199 ATGGCTTCCTTGCTTCGTCCTCCTGCTTATGCCCTCCAACATAATCTAACCACAATCCCCTTCTCTTCTCCGAAACCCACTTCACCCAATAATGTTTCTTTCTTAACACACCGTTTCAAGAGTAACCCTGTAAAGTGTAAAGCTTTTCTGGACAACATTGCCAACGATTTGTTGGAGAACACTATATACCTCGATCAATTCCCTGTTCTTCGATCAGGAATAGTTCAATTTCAGAGATTAACTGAAGATTTATCCGATTTCCAGAAGTGGTGTTTCCTTGTTTTTGCAGGACTGACATGGATTTATTTGACTGCAAGGCCAGGTGTTCTTATAGGCGCCATTGATGCCTACCTTCTGGCTCCTCTGCAGCTCGGCTTGGACAATTTAACGGGAAAAAGGAATCTCAGAAGGACTGATTTTATGATTGGAGATAAGATTGGGGAAGGTTCATTTGGTGTTGTTTATTCTGGTGTCGTGGTTCCGAAGAATGGTTTTGTTGAAGAGAATGTACAGAAGAGGGGAAGAGGAAAGACAGCAATAAATTTGAATGTGAAACCAAAGGATAAAGTTATTCTCAAAAAGGTGAAGGTTGGAATCGTAGGGGCCGAACAATTCGGTGACTTTGAGGAGTGGTTCAATTACAGGCTTTCCAGAGCAGCTCCTGAAACTTGTGCTGAATTCCTGGGAAGTTTTGTAGCTGATAGAACAAATTCACAATTCATAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGACCGCACTCTTGCTGATTACATCAAAGGTCGTAACTTTCCTTCAAACTTAGAGTCTGTCATGTTTGGAAGTGTCTTGCAAGGCATTGTTCACAGAGATGTCAAGCCTGCCAACTTGGTAGTCACTAGACGGGGGCAGATTAAACTCATAGATTTTGGTGCAGCAGCAGACCTTCGAATTGGAAAGAATTATGTACCCAACATTACCTTGCTGGATCCTGACTACTGCCCCCCAGAATTATATGTACTCCCGGAAGAAACACCGAGTCCTCCTCCAGAGCCAATTGCAGCTTTCCTTTCACCAATCTTGTGGCAGCTGAATAGTCCTGATCTGTTTGATACGTACTCTGCTGGGATTGTACTCCTGCAAATGGCAATACCATCTTTAAGGTCTCCAGCTGCCTTGAAGAACTTCAATTTGGAGATCAAAACATGTCAATATGATTTGATCAAATGGAGAGAATTTACTCGCCTTAGGCCCGACTTCCAAATTCTTGACTGTGACTCAGGTCGAGGGTGGGACTTAGCAACAAAGCTTATTTGTGAGAGAGGCCCCTTTAGAAGAGGACGCTTATCTGCTGCAGATGCTTTGAGGCATCCTTATTTTCTTCTGGCTGGTGATCAAGCTGCCGCAGTCCTTTCAAAATTGAGCTTAAGCAGAAAGTGA 1425 0.4323 MASLLRPPAYALQHNLTTIPFSSPKPTSPNNVSFLTHRFKSNPVKCKAFLDNIANDLLENTIYLDQFPVLRSGIVQFQRLTEDLSDFQKWCFLVFAGLTWIYLTARPGVLIGAIDAYLLAPLQLGLDNLTGKRNLRRTDFMIGDKIGEGSFGVVYSGVVVPKNGFVEENVQKRGRGKTAINLNVKPKDKVILKKVKVGIVGAEQFGDFEEWFNYRLSRAAPETCAEFLGSFVADRTNSQFIKGGKWLVWKFEGDRTLADYIKGRNFPSNLESVMFGSVLQGIVHRDVKPANLVVTRRGQIKLIDFGAAADLRIGKNYVPNITLLDPDYCPPELYVLPEETPSPPPEPIAAFLSPILWQLNSPDLFDTYSAGIVLLQMAIPSLRSPAALKNFNLEIKTCQYDLIKWREFTRLRPDFQILDCDSGRGWDLATKLICERGPFRRGRLSAADALRHPYFLLAGDQAAAVLSKLSLSRK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2199 474 Gene3D Phosphorylase Kinase; domain 1 127 251 - -
Prci13g2199 474 ProSiteProfiles Protein kinase domain profile. 140 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2199 474 SMART serkin_6 140 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2199 474 SUPERFAMILY Protein kinase-like (PK-like) 137 456 IPR011009 -
Prci13g2199 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 282 294 IPR008271 GO:0004672|GO:0006468
Prci13g2199 474 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 281 474 - -
Prci13g2199 474 Gene3D Transferase(Phosphotransferase) domain 1 278 458 - -
Prci13g2199 474 Pfam Protein kinase domain 280 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2199 Prci-Chr13 36609429 36612593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2199 140 311 MAP Kinase Kinase Kinase AT3G13530 26.230 7.60e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Prci13g2199 Pkinase 1.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2199 - - qsa:O6P43_016456 719.924