Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2196 ATGAGAAACATCAACTTGTTTCTCCCATGGGTTCTGTTCTTAGCATTTCAAGTTGTTCGAGCTGCGGATTATGTGCCGCCTGATAAAATCCTCTTGAGCTGTGGGGGTCCTCCAGATTCAACCGATACTGATGGAAGAAAATGGACTTCTGATGTTGGGTCCAAGTTCTTGTCCTCTACAGGAAAGTCCAAAAAAGCTGATGCTGCAACACAAGACCCCGCCGTGCCGGAAGTTCCGTATATGACGGCGCGTGTGTTTCAGTCGGAATTCACCTACAGTTTTCCGGTGTCATCTGGTCGGAAATTCATCCGTCTCTACTTCTACCCTTCTTCTTACGACGGACTCAACGCCTCCAATGCGCTCTTCTCCGTCGCTGCTCAATCCTACACGCTTCTTAGGAACTTCAGTGTCGCTCAAACGGTATTAGCTTTGAACTATGACTCTCTTGTGAATGAATATTTGGTCAATGTTGAAGGAGATAGGCTGAATGTAACTTTTACTCCATCTCCCAATGCTTCTAATGCGTATGCCTTTGTTAATGGGATTGAGATTGTGTCTATGCCTCCTGATATTTATGGTGCTTCAAGTGATAGTCCCGAGATTGTGGGTACAAATACTCCTTACACTTTTGATAATAGCACTGCTCTTCAGACTGTTTATAGGCTGAATGTTGGTGGGAATGACATCTCGCCTTCCCATGATACTGGTTTGTTCAGGTCATGGTCGGGTGATACTTTGTATCTTTATGGTGCTGGTTATGGAGTCACTGAGCCTGCTGATCCTGAGGTTAACATCACGTATCCCCCAGGAACACCCTCATATATTGCTCCTGTTGATGTCTACTCTACAGCTAGATCAATGGGGCCGAATGCCAATATCAACATGAATTACAATTTGACTTGGATTTTCTCTGTCGATTCTGGGTTTTCTTATCTTGTGAGACTCCATTTTTGTGAGGGTTCTACAAATATTACCGAGATAAATCAAAGGGTGTTTGATGTATTCCTCGGCAATCAAACTGCTGAAGATGGAGCAGATGTTATTGCTTGGGCAAAGCAATATGCTCTTCCACATGATAATGGGGTTCCAGTGCATAAGGATTATGTTGTGTTTGTACCTGCTGGGCAGCCTCAACAGGATCTGTGGCTTGCACTACATCCGGATGATCAGTCAAAGCCTCAGTACTTAGATGCAATATTGAATGGAGTGGAGATATTCAAAATAAATGATCCTACTGGTAATCTTGCTGGGCCGAATCCTATTCCTGCTCCACAGCAAGATGTTATTGATCCGTCATTGGCTAGAAGCCCAAGTAAAGGCCAATCAAAGAGTCAAATAGGAGCAATTGCTGGAGGTGTTAGTGGGGGAGTAGTTCTATTAATTGTTATCGGACTCATTGCCTTTTCTGCTTCACGTCGTAGGAGGCATGGCAAGAAGGATTCCGGTACAAGTGAAGGGCCATCTGGCTGGCTTCCTCTTTCTCTTTATGGTAACTCACACTCTGCTGGTTCTGCCAAGACGAACACCACAGGAAGCTATGCTTCGTCACTCCCATCAAACCTTTGTCGGCATTTCTCATTTGCTGAAATTCAGGCTGCAACAAACAACTTTGATGAGGCTTTGCTCCTTGGTGTGGGAGGATTTGGTAAGGTTTACAAAGGAGAAATTGATGGTGCAACGACCAAGGTAGCAATCAAACGTGGGAACCCTCTTTCTGAGCAGGGGGTACATGAGTTCCAAACTGAGATTGAAATGCTCTCTAAACTTCGCCACCGGCATCTTGTTTCACTGATTGGCTACTGCGAAGAGAACACTGAAATGATCCTTGTTTATGACTACATGGCTCATGGAACTCTCCGGGAGCATCTGTACAAGACCCAGAAACCTCCACTATCATGGAAGCAGAGGCTTGAGATATGCATTGGAGCTGCTCGAGGTTTACACTATCTACACACTGGTGCCAAGCACACTATCATCCATAGAGATGTGAAGACTACTAACATTTTACTGGATGAGAAGTGGGTAGCAAAGGTTTCTGATTTTGGATTGTCAAAAACGGGTCCAACATTGGATAACACACATGTGAGCACCGTAGTTAAGGGTAGTTTTGGGTACTTGGATCCAGAATACTTCAGGAGGCAACAGCTGACTGACAAATCTGATGTTTACTCCTTTGGGGTGGTTCTTTTCGAGATCTTGTGTGCTCGTCCAGCTTTGAATCCAACCCTTCCAAAAGAGCAAGTGAGCTTGGCAGAGTGGGCTGCTCATTGCTACAAGAAGGGCATTCTCGACCATCTCGTTGATCCTTACTTGAAAGGCAAGATAGCCCCAGAATGCTTCAAAAAGTTTGCCGAGACTGCAATGAAGTGCGTGGCTGATCAGGGCATCGAAAGGCCATCGATGGGGGATGTGCTGTGGAACCTTGAGTTTGCTTTGCAGCTGCAAGAGAGCGCGGACGAGAGCGGTAAGGGCATTGGAGGAATGCATCACATTGATGAGGATGAGCCACTGTATGTAAACTCCAAAGGGAAGGACCCGAACGATGCATTACCGGGTTTCGACGGCAATGTAACCGATTCCAGAAGCTCTGGGATGAGTATGAGCATCGGTGGTCGGAGCCTGGCCAGTGAAGACTCTGATGGATTAACACCAAGCGCAGTATTTTCACAGATCATGAATCCAAAAGGACGTTAA 2694 0.4573 MRNINLFLPWVLFLAFQVVRAADYVPPDKILLSCGGPPDSTDTDGRKWTSDVGSKFLSSTGKSKKADAATQDPAVPEVPYMTARVFQSEFTYSFPVSSGRKFIRLYFYPSSYDGLNASNALFSVAAQSYTLLRNFSVAQTVLALNYDSLVNEYLVNVEGDRLNVTFTPSPNASNAYAFVNGIEIVSMPPDIYGASSDSPEIVGTNTPYTFDNSTALQTVYRLNVGGNDISPSHDTGLFRSWSGDTLYLYGAGYGVTEPADPEVNITYPPGTPSYIAPVDVYSTARSMGPNANINMNYNLTWIFSVDSGFSYLVRLHFCEGSTNITEINQRVFDVFLGNQTAEDGADVIAWAKQYALPHDNGVPVHKDYVVFVPAGQPQQDLWLALHPDDQSKPQYLDAILNGVEIFKINDPTGNLAGPNPIPAPQQDVIDPSLARSPSKGQSKSQIGAIAGGVSGGVVLLIVIGLIAFSASRRRRHGKKDSGTSEGPSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIQAATNNFDEALLLGVGGFGKVYKGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAHGTLREHLYKTQKPPLSWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCYKKGILDHLVDPYLKGKIAPECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESADESGKGIGGMHHIDEDEPLYVNSKGKDPNDALPGFDGNVTDSRSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2196 897 CDD STKc_IRAK 543 809 - -
Prci13g2196 897 FunFam FERONIA receptor-like kinase 29 188 - -
Prci13g2196 897 ProSiteProfiles Protein kinase domain profile. 537 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2196 897 ProSitePatterns Protein kinases ATP-binding region signature. 543 566 IPR017441 GO:0005524
Prci13g2196 897 CDD TM_EGFR-like 444 479 - -
Prci13g2196 897 SMART serkin_6 537 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2196 897 Gene3D Single helix bin 437 475 - -
Prci13g2196 897 FunFam FERONIA receptor-like kinase 214 409 - -
Prci13g2196 897 Gene3D Transferase(Phosphotransferase) domain 1 614 825 - -
Prci13g2196 897 MobiDBLite consensus disorder prediction 431 445 - -
Prci13g2196 897 PANTHER OS03G0124300 PROTEIN-RELATED 11 478 IPR046957 GO:0004672
Prci13g2196 897 Gene3D Phosphorylase Kinase; domain 1 522 613 - -
Prci13g2196 897 MobiDBLite consensus disorder prediction 856 890 - -
Prci13g2196 897 Pfam Malectin-like domain 32 408 IPR024788 -
Prci13g2196 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Prci13g2196 897 SUPERFAMILY Protein kinase-like (PK-like) 511 811 IPR011009 -
Prci13g2196 897 MobiDBLite consensus disorder prediction 844 897 - -
Prci13g2196 897 Pfam Protein tyrosine and serine/threonine kinase 543 805 IPR001245 GO:0004672|GO:0006468
Prci13g2196 897 FunFam Receptor-like protein kinase FERONIA 614 824 - -
Prci13g2196 897 MobiDBLite consensus disorder prediction 415 445 - -
Prci13g2196 897 FunFam Receptor-like protein kinase FERONIA 509 613 - -
Prci13g2196 897 Gene3D - 214 409 - -
Prci13g2196 897 Gene3D - 30 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2196 Prci-Chr13 36602421 36605598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2196 15 897 Receptor kinase-like Gene Family AT3G51550 73.785 0.0 1306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci13g2196 Malectin_like 1.8e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2196 - - gmx:100499644 1436.4