Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2175 ATGCAACATCAACCTTCCATGAAGCAAATCATGGCAATTATGGCTGAAAGAGATGCAGCCATCCAAGAGAGAAATCTGGCCCTTTCTGAAAAAAAGGCAGCTCTTGCAGAGCGTGATATGGCATTCCTGCATCGAGATACTGCCATTGCAGAACGCAACAATGCCATAATGGAACGAGATAGTGCAATTGCTACCCTTCAATATCGAGAGAACTCCTTAGCCAATGGTAGCATGTCTTCATGCCCTCCAGGATGCCAAATTGCCCGAGGTGTCAAGCATGTGCATCATCCTCAGCAACAGGTGCACCATTTACCTCATATGGGTGATACTTCATACAGCACCCGGGAAATGCACACCAGTGATGACCTTCCAGCAGCATCATTGCCTAATGAAGCTGGGAAGTCACGGCGGGCCAAGCGACCAAAGGATGGTAAGTCAACTTCACCTAGTAAGAAGACGCCGCGAGCTGCAAAAAAGATCAAGAGGGAGGGTGAAGACTTGAATAAGATGATGTTTGGCAAGGCGCATGAATGGAAGAGTGGTCAGGAAATGGTTAATGGAGGTGATGATCTTAACAAGCAGTTAGGGTCATCAAAGGCAGATTGGAAGGGTCAGGACTTGGGGTTGAATCAAGTGGTATATGATGAATCAACCATGCCAGCTCCTGTATGCTCTTGTACTGGTGTTCTGAGACAATGTTACAAATGGGGGAATGGGGGCTGGCAGTCTGCTTGTTGCACAACAACTCTATCAATGTATCCACTTCCAGCAGTACCCAACAAGAGACATGCCCGGGTTGGTGGTCGAAAGATGAGTGGAGGTGCTTTCAATAAGTTGCTTAGCCGGCTTGCAGCAGAGGGCCATGATCTGTCAAATGCAGTTGACCTGAAGGACCACTGGGCCAAGCATGGCACAAATCGCTATATCACAATCAAGTAG 939 0.4782 MQHQPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAFLHRDTAIAERNNAIMERDSAIATLQYRENSLANGSMSSCPPGCQIARGVKHVHHPQQQVHHLPHMGDTSYSTREMHTSDDLPAASLPNEAGKSRRAKRPKDGKSTSPSKKTPRAAKKIKREGEDLNKMMFGKAHEWKSGQEMVNGGDDLNKQLGSSKADWKGQDLGLNQVVYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGGAFNKLLSRLAAEGHDLSNAVDLKDHWAKHGTNRYITIK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2175 312 SMART GAGA_bind_2 1 312 IPR010409 -
Prci13g2175 312 MobiDBLite consensus disorder prediction 104 120 - -
Prci13g2175 312 PANTHER - 6 312 IPR010409 -
Prci13g2175 312 MobiDBLite consensus disorder prediction 95 164 - -
Prci13g2175 312 Pfam GAGA binding protein-like family 2 312 IPR010409 -
Prci13g2175 312 MobiDBLite consensus disorder prediction 133 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2175 Prci-Chr13 36490234 36494803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2175 40 312 BBR or BPC Transcription factor family AT5G42520 64.828 3.10e-120 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Prci13g2175 GAGA_bind 4.1e-104 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2175 - - gmx:100783502 554.288