Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2157 ATGGCTTTTCTTTTAACTGACACACATTTTTGTTATAGACCTGAATTCAAACTTGTTGAAGAGATTGTGAAAGACATTTTGAGCAAGTTGAACTATAAGTCATCATCATCTCATCTTGAAGGACTTGTTGGCATTGCTCATCAAATTGAAAATGTTGAAAAACTTTTAAAAGAGGCTCGCATTGTAGGAATATGGGGCATGGGTAGTGCAGGTAAAACCACACTTGCCAAAGCTATATTTCGAGAGTTGAAAGCTCAATTTGATGCTTTCTCCTTTATTGAAAATGTCAAAGAGCAATTAGAAAGAATAAGTTTGGATGAGTTACAGAAAAATTGCCTCAAAGAATTATTAAAAGATGATGACATTAACATCAACGACATAAAATCCATTTTTGTGAAAACTAGGCTTCAACGCAAAAAGATTCTTCTTATACTTGATGATGTGGAGAATTCAATAATAGCTGACGATTTAAACAAAGTATGTGATTGGTTTAGAGAAGGAAGTAGAATTATCATCACATCAAGAGACAAGCAAGTTCTTAAGAATGCTTCTGCTTTTTCAAGATATCATGTTCCGAGATTGGATTTTCATGATGCCCTTTTTCTCTTTAGTTTGAAAGCATTTAAGCAAAATGAGCCATGTAAAGGCTATATAGAGCTATCAAAATCAGTAGTGCGTTATTGTGAAGAAAATCCATTGGCCTTGGTTGTGTTGGGTTGTTTTCTATATGGTAGAGAAAAGAAAGAGTGGGAAAGTGCATTGGAAAAACTAAATCAAGCCCCTCCAAAGGACATTGTTGATGTTTTGAAATTCAATTTTGATGGACTTGATGACATACAACATAATGTGTTTCTTGACTTGGTATTTTTTATCATGGAAGGAGGTGAGTTTTTGAACCTCATTATAAGACAATTATATGGCTCTTCTATACATGTTGAGATAAGTGTTCTTACTGAAAGATCCCTCATTTCATTCAATGATAATGGCTGCATTGGGATGCACCATCTTGTATGGCAAATGGGCCTTCAAATTGCCAGACAACAGTCATTCTCTATTCCTAGAGCCTCTGTTAGACTCTGGAGGCACGAAGACATTTATGATTTTTTCATTCGTGAAAAGCATTTTCCAAATTTAAGGGAAATCATTCTAGCAGGCTCAAAACCTCACTGCATTCCCAGATCTGCGTCACGCCCCAAAGATTGA 1203 0.3541 MAFLLTDTHFCYRPEFKLVEEIVKDILSKLNYKSSSSHLEGLVGIAHQIENVEKLLKEARIVGIWGMGSAGKTTLAKAIFRELKAQFDAFSFIENVKEQLERISLDELQKNCLKELLKDDDININDIKSIFVKTRLQRKKILLILDDVENSIIADDLNKVCDWFREGSRIIITSRDKQVLKNASAFSRYHVPRLDFHDALFLFSLKAFKQNEPCKGYIELSKSVVRYCEENPLALVVLGCFLYGREKKEWESALEKLNQAPPKDIVDVLKFNFDGLDDIQHNVFLDLVFFIMEGGEFLNLIIRQLYGSSIHVEISVLTERSLISFNDNGCIGMHHLVWQMGLQIARQQSFSIPRASVRLWRHEDIYDFFIREKHFPNLREIILAGSKPHCIPRSASRPKD 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2157 400 Pfam NB-ARC domain 53 261 IPR002182 GO:0043531
Prci13g2157 400 Gene3D - 32 187 IPR027417 -
Prci13g2157 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 287 IPR027417 -
Prci13g2157 400 Gene3D - 194 277 IPR042197 -
Prci13g2157 400 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 381 IPR044974 GO:0006952
Prci13g2157 400 SUPERFAMILY "Winged helix" DNA-binding domain 264 367 IPR036390 -
Prci13g2157 400 PRINTS Disease resistance protein signature 228 242 - -
Prci13g2157 400 PRINTS Disease resistance protein signature 135 149 - -
Prci13g2157 400 PRINTS Disease resistance protein signature 61 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2157 Prci-Chr13 36295217 36303283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2157 43 360 WRKY Transcription Factor Family AT5G45050 34.756 7.61e-47 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2157 - - pcin:129291819 738.413