Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2156 ATGGGTAGTGCAGGTAAAACCACACTTGCCAAAGCTATATTTCGAGAGTTGAAAGCTCAATTTGATGCTTTCTCCTTTATTGAAAATGTCAAAGAGCAATTAGAAAGAATAAGTTTGGATGAGTTACAGAAAAATTGCCTCAAAGAATTATTAAAAGATGATGACATTAACATCAACGACATAAAATCCATTTTTGTGAAAACTAGGCTTCAACGCAAAAAGATTCTTCTTATACTTGATGATGTGGAGAATTCAATAATAGCTGACGATTTAAACAAAGTATGTGATTGGTTTAGAGAAGGAAGTAGAATTATCATCACATCAAGAGACAAGCAAGTTCTTAAGAATGCTTCTGCTTTTTCAAGATATCATGTTCCGAGATTGGATTTTCATGATGCCCTTTTTCTCTTTAGTTTGAAAGCATTTAAGCAAAATGAGCCATGTAAAGGCTATATAGAGCTATCAAAATCAGTAGTGCGTTATTGTGAAGAAAATCCATTGGCCTTGGTTGTGTTGGGTTGTTTTCTATATGGTAGAGAAAAGAAAGAGTGGGAAAGTGCATTGGAAAAACTAAATCAAGCCCCTCCAAAGGACATTGTTGATGTTTTGAAATTCAATTTTGATGGACTTGATGACATACAACATAATGTGTTTCTTGACTTGGTATTTTTTATCATGGAAGGAGGTGAGTTTTTGAACCTCATTATAAGACAATTATATGGCTCTTCTATACATGTTGAGATAAGTGTTCTTACTGAAAGATCCCTCATTTCATTCAATGATAATGGCTGCATTGGGATGCACCATCTTGTATGGCAAATGGGCCTTCAAATTGCCAGACAACAGTCATTCTCTATTCCTAGAGCCTCTGTTAGACTCTGGAGGCACGAAGACATTTATGATTTTTTCATTCGTGAAAAGGGGATTGAGGACATTCGATGCATGTTATTAGATGCGAGCAAGATAAAAAGAATCACATTGAGGGCCGGTGATTTTGGAAAGATGCATAATTTAATATTCCTTAAAGTTTACAAATCTAATCGGAGAAAGCCTTTGAAGTTGAACATTTGTGGAGATCTAAATTATCTTTCGGAAGAACTAAGGTTTCTAAAATGGGAAGAATACCCACTGCCATATGTGCCATTAAATTTTTGTGCGGAGAATCTTGTTCAACTTTCAATGCCTAATAGTAATATCCAAAAACTCTTGAGTGGAGATCAGCATTTTCCAAATTTAAGGGAAATCATTCTAGCAGGCTCAAAACCTCACTGCATTCCCAGATCTGCGTCACGCCCCAAAGATTGA 1305 0.3563 MGSAGKTTLAKAIFRELKAQFDAFSFIENVKEQLERISLDELQKNCLKELLKDDDININDIKSIFVKTRLQRKKILLILDDVENSIIADDLNKVCDWFREGSRIIITSRDKQVLKNASAFSRYHVPRLDFHDALFLFSLKAFKQNEPCKGYIELSKSVVRYCEENPLALVVLGCFLYGREKKEWESALEKLNQAPPKDIVDVLKFNFDGLDDIQHNVFLDLVFFIMEGGEFLNLIIRQLYGSSIHVEISVLTERSLISFNDNGCIGMHHLVWQMGLQIARQQSFSIPRASVRLWRHEDIYDFFIREKGIEDIRCMLLDASKIKRITLRAGDFGKMHNLIFLKVYKSNRRKPLKLNICGDLNYLSEELRFLKWEEYPLPYVPLNFCAENLVQLSMPNSNIQKLLSGDQHFPNLREIILAGSKPHCIPRSASRPKD 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2156 434 SUPERFAMILY L domain-like 313 426 - -
Prci13g2156 434 SUPERFAMILY "Winged helix" DNA-binding domain 198 301 IPR036390 -
Prci13g2156 434 Pfam NB-ARC domain 1 195 IPR002182 GO:0043531
Prci13g2156 434 Gene3D Ribonuclease Inhibitor 309 432 IPR032675 -
Prci13g2156 434 PRINTS Disease resistance protein signature 162 176 - -
Prci13g2156 434 PRINTS Disease resistance protein signature 69 83 - -
Prci13g2156 434 Gene3D - 128 211 IPR042197 -
Prci13g2156 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 221 IPR027417 -
Prci13g2156 434 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 421 IPR044974 GO:0006952
Prci13g2156 434 Gene3D - 1 121 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2156 Prci-Chr13 36295216 36303283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2156 1 421 WRKY Transcription Factor Family AT5G45050 33.409 4.99e-57 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2156 - - pcin:129291819 861.292