Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2154 ATGGCTTTTCTTTTAACTGACACACATTTTTGTTATAGACCTGAATTCAAACTTGTTGAAGAGATTGTGAAAGACATTTTGAGCAAGTTGAACTATAAGTCATCATCATCTCATCTTGAAGGACTTGTTGGCATTGCTCATCAAATTGAAAATGTTGAAAAACTTTTAAAAGAGGCTCGCATTGTAGGAATATGGGGCATGGGTAGTGCAGGTAAAACCACACTTGCCAAAGCTATATTTCGAGAGTTGAAAGCTCAATTTGATGCTTTCTCCTTTATTGAAAATGTCAAAGAGCAATTAGAAAGAATAAGTTTGGATGAGTTACAGAAAAATTGCCTCAAAGAATTATTAAAAGATGATGACATTAACATCAACGACATAAAATCCATTTTTGTGAAAACTAGGCTTCAACGCAAAAAGATTCTTCTTATACTTGATGATGTGGAGAATTCAATAATAGCTGACGATTTAAACAAAGTATGTGATTGGTTTAGAGAAGGAAGTAGAATTATCATCACATCAAGAGACAAGCAAGTTCTTAAGAATGCTTCTGCTTTTTCAAGATATCATGTTCCGAGATTGGATTTTCATGATGCCCTTTTTCTCTTTAGTTTGAAAGCATTTAAGCAAAATGAGCCATGTAAAGGCTATATAGAGCTATCAAAATCAGTAGTGCGTTATTGTGAAGAAAATCCATTGGCCTTGGTTGTGTTGGGTTGTTTTCTATATGGTAGAGAAAAGAAAGAGTGGGAAAGTGCATTGGAAAAACTAAATCAAGCCCCTCCAAAGGACATTGTTGATGTTTTGAAATTCAATTTTGATGGACTTGATGACATACAACATAATGTGTTTCTTGACTTGGTATTTTTTATCATGGAAGGAGGTGAGTTTTTGAACCTCATTATAAGACAATTATATGGCTCTTCTATACATGTTGAGATAAGTGTTCTTACTGAAAGATCCCTCATTTCATTCAATGATAATGGCTGCATTGGGATGCACCATCTTGTATGGCAAATGGGCCTTCAAATTGCCAGACAACAGTCATTCTCTATTCCTAGAGCCTCTGTTAGACTCTGGAGGCACGAAGACATTTATGATTTTTTCATTCGTGAAAAGGGGATTGAGGACATTCGATGCATGTTATTAGATGCGAGCAAGATAAAAAGAATCACATTGAGGGCCGGTGATTTTGGAAAGATGCATAATTTAATATTCCTTAAAGTTTACAAATCTAATCGGAGAAAGCCTTTGAAGTTGAACATTTGTGGAGATCTAAATTATCTTTCGGAAGAACTAAGGTTTCTAAAATGGGAAGAATACCCACTGCCATATGTGCCATTAAATTTTTGTGCGGAGAATCTTGTTCAACTTTCAATGCCTAATAGTAATATCCAAAAACTCTTGAGTGGAGATCAGCATTTTCCAAATTTAAGGGAAATCATTCTAGCAGGCTCAAAACCTCACTGCATTCCCAGATCTGCGTCACGCCCCAAAGATTGA 1503 0.3546 MAFLLTDTHFCYRPEFKLVEEIVKDILSKLNYKSSSSHLEGLVGIAHQIENVEKLLKEARIVGIWGMGSAGKTTLAKAIFRELKAQFDAFSFIENVKEQLERISLDELQKNCLKELLKDDDININDIKSIFVKTRLQRKKILLILDDVENSIIADDLNKVCDWFREGSRIIITSRDKQVLKNASAFSRYHVPRLDFHDALFLFSLKAFKQNEPCKGYIELSKSVVRYCEENPLALVVLGCFLYGREKKEWESALEKLNQAPPKDIVDVLKFNFDGLDDIQHNVFLDLVFFIMEGGEFLNLIIRQLYGSSIHVEISVLTERSLISFNDNGCIGMHHLVWQMGLQIARQQSFSIPRASVRLWRHEDIYDFFIREKGIEDIRCMLLDASKIKRITLRAGDFGKMHNLIFLKVYKSNRRKPLKLNICGDLNYLSEELRFLKWEEYPLPYVPLNFCAENLVQLSMPNSNIQKLLSGDQHFPNLREIILAGSKPHCIPRSASRPKD 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2154 500 Gene3D Ribonuclease Inhibitor 375 498 IPR032675 -
Prci13g2154 500 SUPERFAMILY L domain-like 379 492 - -
Prci13g2154 500 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 487 IPR044974 GO:0006952
Prci13g2154 500 PRINTS Disease resistance protein signature 228 242 - -
Prci13g2154 500 PRINTS Disease resistance protein signature 61 76 - -
Prci13g2154 500 PRINTS Disease resistance protein signature 135 149 - -
Prci13g2154 500 Pfam NB-ARC domain 53 261 IPR002182 GO:0043531
Prci13g2154 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 287 IPR027417 -
Prci13g2154 500 Gene3D - 194 277 IPR042197 -
Prci13g2154 500 Gene3D - 20 187 IPR027417 -
Prci13g2154 500 SUPERFAMILY "Winged helix" DNA-binding domain 264 367 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2154 Prci-Chr13 36295215 36303283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2154 43 487 WRKY Transcription Factor Family AT5G45050 33.546 2.04e-62 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2154 - - pcin:129291819 991.49