Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2142 ATGGGCAATTGTGGCACCAGAGAGGAATCCGCTGTTGTCTCCAACGCTCAAGTTCAACAGCTGCACATGTCGTCCTTGACATCTAAAAGTGCTGCCAGCGACAAGAAGCACCATCGGTCTGTGTCAGATCTGAGCGACATTTCCACCCCGCGGCACAACTTCGAAGATGCCAGGAAGAATACACTACTCTATACTCATGTCATTGCTTTCACATTGTATGAGCTTGAGACTATTACGAAGAGTTTTCGCTCCGATTATATCCTCGGAGAAGGGGGCTTCGGCACTGTCTATAAAGGTTATATTGACGAGAATGTGAGAGTTGGACTCAAATCCCTTCCTGTCGCTGTCAAGGTTCTGAACAAGGAGGGTCTTCAGGGACATCGCGAGTGGCTTACAGAAGTCAATTTCCTGGGCCAGCTCCGGCATCCTAATTTGGTTAAGTTGATCGGATACTGCTGTGAGGACGATCACAGGCTACTTGTATACGAGTTCATGTTTCGAGGAAGTTTAGAGAATCATCTATTCCGAAAGGCAACTGCTCCTTTATCATGGGCTACAAGAATGATGATTGCCCTTGGAGCTGCTAAGGGGCTTGCTTTTCTTCATAATGCTGAGAGGCCAGTAATCTATCGAGACTTCAAAACTTCTAATATATTATTGGACTCCGATTATACAGCTAAGCTTTCTGATTTTGGACTAGCAAAAGCTGGACCACAAGGTGATGAAACCCATGTGTCCACCAGGGTCATGGGTACCTATGGATATGCTGCTCCTGAATATGTAATGACTGGCCACCTGACTGCAAGGAGCGATGTGTATAGCTTTGGAGTTGTTCTTTTGGAACTTTTAACTGGAAGGAAATCTGTTGACAAAACAAGACCAGGTAAGGAACAGAGCTTGGTAGATTGGGCCAGACCAAAGCTTAATGACAAGAGAAAGCTCCTGCAGATAATTGATCCTAGATTGGATAGCCAATACTCAGTAAGGGCAGCGCAGAAAGCATGTAGCTTGGCTTACTACTGTTTGAGTCAAAATCCCAAAGCCAGGCCATTAATGAGTGATGTAGTTGAGACGTTGGAACCTTTACAAAGTTGTAGTGATGGTGCTGGTGAAGTCTTATCATTGGGACCAAGTAACGGAGGAGCCGGTCCCTTTGCCATGAGTGGAATCTCTGACTATCAGATGCGCAAGAGGTTTTCAAACAATGTTGGTCCAGGCGCTAGTTGCCGGTCCCCGAACCCAAACTGCTCACCTGGCGCCCCTGCTGCTTGCAGGGTCAGATGA 1284 0.4665 MGNCGTREESAVVSNAQVQQLHMSSLTSKSAASDKKHHRSVSDLSDISTPRHNFEDARKNTLLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATAPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLDSQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSCSDGAGEVLSLGPSNGGAGPFAMSGISDYQMRKRFSNNVGPGASCRSPNPNCSPGAPAACRVR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2142 427 FunFam Probable serine/threonine-protein kinase PBL8 165 375 - -
Prci13g2142 427 CDD STKc_IRAK 88 362 - -
Prci13g2142 427 Gene3D Phosphorylase Kinase; domain 1 40 164 - -
Prci13g2142 427 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2142 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Prci13g2142 427 SUPERFAMILY Protein kinase-like (PK-like) 59 360 IPR011009 -
Prci13g2142 427 MobiDBLite consensus disorder prediction 31 50 - -
Prci13g2142 427 PANTHER OS01G0588500 PROTEIN-RELATED 38 363 - -
Prci13g2142 427 MobiDBLite consensus disorder prediction 404 427 - -
Prci13g2142 427 Pfam Protein tyrosine and serine/threonine kinase 87 359 IPR001245 GO:0004672|GO:0006468
Prci13g2142 427 Gene3D Transferase(Phosphotransferase) domain 1 165 370 - -
Prci13g2142 427 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Prci13g2142 427 FunFam Serine/threonine-protein kinase BIK1 48 164 - -
Prci13g2142 427 MobiDBLite consensus disorder prediction 24 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2142 Prci-Chr13 36246623 36251349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2142 70 369 Glycoside Hydrolase AT3G07070 53.795 2.72e-108 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci13g2142 PK_Tyr_Ser-Thr 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2142 - - rcu:8283036 762.296