Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2112 ATGCCCTCAACCCTTTCCCTCTTCACAAGACTAGCAAAACTGGGTTTTCACTGGAAAGTGGAAAGTGATGCAGAAGAAAGCGATGAAGATCTGTTCAGAGTGCCGGACATGGAAGCGACGGCAGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGAGGCAGTGATTTCAAATGGGAATACGAAGGCAGCAGGAAGCTTAAGCAATGTGACAGTGACAGATTCTCAGCTTCAGAGTGGAAAACGAAGAAGAGGAAGAAATCCTGCTGACAAAGAGTGCAGACGCCTCAAGAGGTTGTTGAGGAACAGAGTATCAGCACAGCAAGCAAGAGAGAGGAAGAAAGTGTATGTGAATGAGTTGGAAGGAAGAGCCAAAGAGTTGCAAGACCAGAATTCCAAGTTGGAAGAGCGTATCTCCACTTTGATCAATGAGAACACTATGCTTCGTAAGGTTCTTATGAACACAAGGCCTAAAGTTGATGAAAGCAGTGAACCAAAGCAAGATCAATTAAGTAAAAACTAA 519 0.4586 MPSTLSLFTRLAKLGFHWKVESDAEESDEDLFRVPDMEATAGGGGGGGGGGEAVISNGNTKAAGSLSNVTVTDSQLQSGKRRRGRNPADKECRRLKRLLRNRVSAQQARERKKVYVNELEGRAKELQDQNSKLEERISTLINENTMLRKVLMNTRPKVDESSEPKQDQLSKN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2112 172 Gene3D Single helix bin 112 153 - -
Prci13g2112 172 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 96 111 IPR004827 GO:0003700|GO:0006355
Prci13g2112 172 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 91 154 IPR004827 GO:0003700|GO:0006355
Prci13g2112 172 SMART brlzneu 89 153 IPR004827 GO:0003700|GO:0006355
Prci13g2112 172 MobiDBLite consensus disorder prediction 153 172 - -
Prci13g2112 172 MobiDBLite consensus disorder prediction 24 91 - -
Prci13g2112 172 SUPERFAMILY Leucine zipper domain 93 152 IPR046347 GO:0003700|GO:0006355
Prci13g2112 172 MobiDBLite consensus disorder prediction 58 77 - -
Prci13g2112 172 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 20 167 IPR044280 GO:0000981|GO:0045944
Prci13g2112 172 Coils Coil 109 150 - -
Prci13g2112 172 CDD bZIP_HY5-like 103 144 - -
Prci13g2112 172 FunFam Transcription factor HY5 112 153 - -
Prci13g2112 172 Pfam bZIP transcription factor 90 149 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2112 Prci-Chr13 36095337 36099265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2112 72 161 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 72.222 2.29e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci13g2112 bZIP_1 1.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2112 K16241 - gmx:778143 182.956