Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2111 ATGTCTCTTCAACTGAAGGAAGGATCAGTAGTGTCTGCTTCTTCTTCATCTTCTTCATGGAACCACAGGCTCAACAGCCATGCCCTCAACCCTTTCCCTCTTCACAAGACTAGCAAAACTGAAGAAAGCGATGAAGATCTGTTCAGAGTGCCGGACATGGAAGCGACGGCAGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGAGGCAGTGATTTCAAATGGGAATACGAAGGCAGCAGGAAGCTTAAGCAATGTGACAGTGACAGATTCTCAGCTTCAGAGTGGAAAACGAAGAAGAGGAAGAAATCCTGCTGACAAAGAGTGCAGACGCCTCAAGAGGTTGTTGAGGAACAGAGTATCAGCACAGCAAGCAAGAGAGAGGAAGAAAGTGTATGTGAATGAGTTGGAAGGAAGAGCCAAAGAGTTGCAAGACCAGAATTCCAAGTTGGAAGAGCGTATCTCCACTTTGATCAATGAGAACACTATGCTTCGTAAGGTTCTTATGAACACAAGGCCTAAAGTTGATGAAAGCAGTGAACCAAAGCAAGATCAATTAAGTAAAAACTAA 567 0.4586 MSLQLKEGSVVSASSSSSSWNHRLNSHALNPFPLHKTSKTEESDEDLFRVPDMEATAGGGGGGGGGGEAVISNGNTKAAGSLSNVTVTDSQLQSGKRRRGRNPADKECRRLKRLLRNRVSAQQARERKKVYVNELEGRAKELQDQNSKLEERISTLINENTMLRKVLMNTRPKVDESSEPKQDQLSKN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2111 188 MobiDBLite consensus disorder prediction 37 51 - -
Prci13g2111 188 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 107 170 IPR004827 GO:0003700|GO:0006355
Prci13g2111 188 MobiDBLite consensus disorder prediction 169 188 - -
Prci13g2111 188 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 13 183 IPR044280 GO:0000981|GO:0045944
Prci13g2111 188 MobiDBLite consensus disorder prediction 1 105 - -
Prci13g2111 188 MobiDBLite consensus disorder prediction 74 93 - -
Prci13g2111 188 Gene3D Single helix bin 128 169 - -
Prci13g2111 188 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 112 127 IPR004827 GO:0003700|GO:0006355
Prci13g2111 188 MobiDBLite consensus disorder prediction 1 26 - -
Prci13g2111 188 Coils Coil 125 166 - -
Prci13g2111 188 Pfam bZIP transcription factor 106 165 IPR004827 GO:0003700|GO:0006355
Prci13g2111 188 FunFam Transcription factor HY5 128 169 - -
Prci13g2111 188 CDD bZIP_HY5-like 119 160 - -
Prci13g2111 188 SMART brlzneu 105 169 IPR004827 GO:0003700|GO:0006355
Prci13g2111 188 SUPERFAMILY Leucine zipper domain 109 168 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2111 Prci-Chr13 36095265 36099265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2111 88 177 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 72.222 2.91e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci13g2111 bZIP_1 2.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2111 K16241 - gmx:778143 206.068