Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2110 ATGGAGTTTTGGGATTTACGGGTTGGCTTCTTTCTGTTGTATAGTTTCTGGGTTGGCGTTTTCTGTGATCAAGATGGTTTCTTAAGCCTATCTTGTGGTGGAAGAACCAGTTTCAATGATTCATCTAACATCTCATGGACCCCAGACACTGCATACATAAGCACAGGCACTACAGCCATCAGTTACAATGATAACGACTCCTCATCATATGTCTCTCTTCGGTTCTTCCCGGATTCCCAAGGTCGAAAATGCTATAAATTACCTTTGACTAATGTGACAAGTCTTGTTCTTGTTAGAGCAAAGTTTGTGTACAACAACTATGATGGACTTGAGCATCCTCCTACATTCTCTGTTTCTCTTGGGACAGCCATTGCTGCTATTGTAAATCTTACTAAAGATGATCCATGGACCGAAGAGTTTCTATGGACAGTCAATACGGACACACTACCCTTCTGTCTACTTGCTGCCTCACATGGTGGATTTCCTGTAATTTCTTCCCTTGAAATCCGACCTCTTCCTCCAGGAGCCTACACAAATGGCATGGAATATTTCTCAAATAAGTTACTGAGGAAGAGTTATCGAATTGATTGTGGCTACACCAATGAGTCTATCCGCGCTGTAAAACGCAGGTACCCTCTGGATCCATATGATAGAATATGGGATGCTGATAGAAGTTTTGCACCCTTTCATGTTGCAACTGGATTCAAGGTTCAGCTTACTTTCAATCAGTCCAGTCTAATGGAAAAACCACCAGCTGCTGTTCTTCAATCCGGGAGAGTTCTGGCACGGCGAAATCTGCTGACATATAACCTCCCTCTTGATGCAGTAGGGGACTATTATATCATTCTCTATTTTGCTGGCATTCTTCCTGTTTTCCCCGCCTTTGATGTTTTCATAAATGGAGATCTCATAAAATCAAACTACAAAATAAAGAGTTCAGAAATCAGTGCCCTATATGTAACACGAAAGGGGATCGGCAGCTTGAATATAACACTGAAGAGTATCAGCTTTTACCCTCAAATCAATGCATTTGAGGTATATCAGATGGTTGATATTCCATCCGAAGTCTCTTCAACCACAGTCTCCGCACTACAAGTTATTCAGCAGTCTGCTGGCTTGGATCTAGGATGGCAAGATGATCCATGCTCGCCTTCACCATGGGATCATATTGGCTGTGAAGGAAGCCTTGTCACATCATTGGATCTCTCCGGTGTGAATTTCAGATCAATTACGCCTACATTTGGTGACTTGTTGGACCTCAAAAAATTAGATTTGCACAACGCTTCGCTTGCTGGTGAAATACAGAACTTGGGAAGCTTGCAACATCTTGAGAAACTGAACCTGAGTTTCAATCAGCTAAAATCCTTTGGAGTGGAGCTGGACAACTTGGTTAGCCTTCGAATCTTGGACTTGCAAAACAATAGCCTCCAAGGATTGGTTCCTGATAGCTTGGGAGAGTTAGAAAACCTCCATTTTCTGAATCTGGAAAACAACAAGCTACAAGGTCCACTACCAGAGTCCTTGAACAAAGCAACCGTAGAGATCAGAACATCTGGGAATTTGTGTCTTTCATTCTACGCAGCCATATGCGATGATGCATCATTCGCTCCTTCAATTGAGACACCACAAGTTACAATAATTCCCAGAATGAAGCACAAAACGCATAGACATCTTGCAATCATACTAAGCTTGGTTGGCGGAGCCACACTTGTGTTTTTGTTTATCTTTCTTTGGGTACTGCTACACATGACTAAAAAGAGATATGAAATCTCTCACACAGCAAGAGTAGAAATTAATATGAGGAACTGGGGCGCAGCAAAAGTGTTTTCCTACAAAGAAATCAAAGTAGCTACTGGAAACTTTAAAGAAGTTATAGGAAGAGGCAGTTTTGGATCAGTTTACCATGGAAAGCTTCCAGATGGTAAATCAGTCGCTGTCAAAGTTCGGCTGGACAAAACCCAACTAGGAGCTGATTCTTTCATCAATGAGGTTCACCTTTTGTCAAAAATCCGCCATCAAAATCTGGTGTCATTGGAAGGATTTTGTCATGAATCAAAGCATCAGATACTAGTGTACGAGTATTTGGCCGGTGGATCACTAAATGATCACCTTTATGGTACAAACAGCCAAAAAAGGTCATTAAGCTGGGTTCGAAGATTGAAAATAGCAGTTGATGCAGCAAAAGGACTGGATTATTTACATAATGGAAGTGAACCACGAATCATACACCGTGACGTCAAGTGCAGTAACATCCTCTTGGATATGGAGATGAACGGAAAGGTCTGTGACTTTGGTCTCTCCAAGCAAGTAACCAAGGCAGATGCAACTCATGTCACCACTGTTGTCAAGGGCACTGCTGGCTATCTAGACCCTGAGTATTATTCCACCCAACAGCTCACTGAGAAAAGTGATGTATATAGCTTTGGTGTTGTTCTTTTGGAACTCATCTGTGGCAGAGAGCCATTGAATCACTCTGGGTCTCCTGATTCTTTCAATTTGGTGTTATGGGCAAAGCCTTACTTGCAGGCAGAAGCATATGAAATTGTGGATGAAAGCATAAAAGGAAATTTTGATCTGGAGAGCATGAGGAAGACAGCCTCCATTGCTGTGAAGTCAGCGGAAAGGGATGCATCACTGAGACCAACTATTGCAGAAGTATTAGCTGAACTAAAAGAAGCATATGAGATTCAGCTCAGATATCTTGAGTCTCGGTGA 2715 0.421 MEFWDLRVGFFLLYSFWVGVFCDQDGFLSLSCGGRTSFNDSSNISWTPDTAYISTGTTAISYNDNDSSSYVSLRFFPDSQGRKCYKLPLTNVTSLVLVRAKFVYNNYDGLEHPPTFSVSLGTAIAAIVNLTKDDPWTEEFLWTVNTDTLPFCLLAASHGGFPVISSLEIRPLPPGAYTNGMEYFSNKLLRKSYRIDCGYTNESIRAVKRRYPLDPYDRIWDADRSFAPFHVATGFKVQLTFNQSSLMEKPPAAVLQSGRVLARRNLLTYNLPLDAVGDYYIILYFAGILPVFPAFDVFINGDLIKSNYKIKSSEISALYVTRKGIGSLNITLKSISFYPQINAFEVYQMVDIPSEVSSTTVSALQVIQQSAGLDLGWQDDPCSPSPWDHIGCEGSLVTSLDLSGVNFRSITPTFGDLLDLKKLDLHNASLAGEIQNLGSLQHLEKLNLSFNQLKSFGVELDNLVSLRILDLQNNSLQGLVPDSLGELENLHFLNLENNKLQGPLPESLNKATVEIRTSGNLCLSFYAAICDDASFAPSIETPQVTIIPRMKHKTHRHLAIILSLVGGATLVFLFIFLWVLLHMTKKRYEISHTARVEINMRNWGAAKVFSYKEIKVATGNFKEVIGRGSFGSVYHGKLPDGKSVAVKVRLDKTQLGADSFINEVHLLSKIRHQNLVSLEGFCHESKHQILVYEYLAGGSLNDHLYGTNSQKRSLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMEMNGKVCDFGLSKQVTKADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLNHSGSPDSFNLVLWAKPYLQAEAYEIVDESIKGNFDLESMRKTASIAVKSAERDASLRPTIAEVLAELKEAYEIQLRYLESR 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2110 904 CDD STKc_IRAK 625 892 - -
Prci13g2110 904 Pfam Malectin-like domain 30 349 IPR024788 -
Prci13g2110 904 Pfam Protein tyrosine and serine/threonine kinase 621 889 IPR001245 GO:0004672|GO:0006468
Prci13g2110 904 Gene3D - 191 351 - -
Prci13g2110 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Prci13g2110 904 ProSiteProfiles Protein kinase domain profile. 619 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2110 904 Gene3D Phosphorylase Kinase; domain 1 582 694 - -
Prci13g2110 904 ProSitePatterns Protein kinases ATP-binding region signature. 625 647 IPR017441 GO:0005524
Prci13g2110 904 SMART serkin_6 619 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2110 904 Gene3D Transferase(Phosphotransferase) domain 1 695 900 - -
Prci13g2110 904 Pfam Leucine rich repeat 442 500 IPR001611 GO:0005515
Prci13g2110 904 SUPERFAMILY Protein kinase-like (PK-like) 599 890 IPR011009 -
Prci13g2110 904 Gene3D Ribonuclease Inhibitor 359 531 IPR032675 -
Prci13g2110 904 PANTHER OS07G0107800 PROTEIN-RELATED 459 894 - -
Prci13g2110 904 FunFam serine/threonine-protein kinase PBS1-like 587 694 - -
Prci13g2110 904 SUPERFAMILY L domain-like 363 512 - -
Prci13g2110 904 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 695 902 - -
Prci13g2110 904 ProSiteProfiles Leucine-rich repeat profile. 442 464 IPR001611 GO:0005515
Prci13g2110 904 SMART LRR_typ_2 463 486 IPR003591 -
Prci13g2110 904 SMART LRR_typ_2 487 511 IPR003591 -
Prci13g2110 904 SMART LRR_typ_2 440 462 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2110 Prci-Chr13 36080085 36087199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2110 1 903 Receptor kinase-like Gene Family AT5G48740 62.058 0.0 1091
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g2110 Malectin_like 9.1e-53 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2110 - - aprc:113850446 1413.28