Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2109 ATGGAGTTTTGGGATTTACGGGTTGGCTTCTTTCTGTTGTATAGTTTCTGGGTTGGCGTTTTCTGTGATCAAGATGGTTTCTTAAGCCTATCTTGTGGTGGAAGAACCAGTTTCAATGATTCATCTAACATCTCATGGACCCCAGACACTGCATACATAAGCACAGGCACTACAGCCATCAGTTACAATGATAACGACTCCTCATCATATGTCTCTCTTCGGTTCTTCCCGGATTCCCAAGGTCGAAAATGCTATAAATTACCTTTGACTAATGTGACAAGTCTTGTTCTTGTTAGAGCAAAGTTTGTGTACAACAACTATGATGGACTTGAGCATCCTCCTACATTCTCTGTTTCTCTTGGGACAGCCATTGCTGCTATTGTAAATCTTACTAAAGATGATCCATGGACCGAAGAGTTTCTATGGACAGTCAATACGGACACACTACCCTTCTGTCTACTTGCTGCCTCACATGGTGGATTTCCTGTAATTTCTTCCCTTGAAATCCGACCTCTTCCTCCAGGAGCCTACACAAATGGCATGGAATATTTCTCAAATAAGTTACTGAGGAAGAGTTATCGAATTGATTGTGGCTACACCAATGAGTCTATCCGGTACCCTCTGGATCCATATGATAGAATATGGGATGCTGATAGAAGTTTTGCACCCTTTCATGTTGCAACTGGATTCAAGGTTCAGCTTACTTTCAATCAGTCCAGTCTAATGGAAAAACCACCAGCTGCTGTTCTTCAATCCGGGAGAGTTCTGGCACGGCGAAATCTGCTGACATATAACCTCCCTCTTGATGCAGTAGGGGACTATTATATCATTCTCTATTTTGCTGGCATTCTTCCTGTTTTCCCCGCCTTTGATGTTTTCATAAATGGAGATCTCATAAAATCAAACTACAAAATAAAGAGTTCAGAAATCAGTGCCCTATATGTAACACGAAAGGGGATCGGCAGCTTGAATATAACACTGAAGAGTATCAGCTTTTACCCTCAAATCAATGCATTTGAGGTATATCAGATGGTTGATATTCCATCCGAAGTCTCTTCAACCACAGTCTCCGCACTACAAGTTATTCAGCAGTCTGCTGGCTTGGATCTAGGATGGCAAGATGATCCATGCTCGCCTTCACCATGGGATCATATTGGCTGTGAAGGAAGCCTTGTCACATCATTGGATCTCTCCGGTGTGAATTTCAGATCAATTACGCCTACATTTGGTGACTTGTTGGACCTCAAAAAATTAGATTTGCACAACGCTTCGCTTGCTGGTGAAATACAGAACTTGGGAAGCTTGCAACATCTTGAGAAACTGAACCTGAGTTTCAATCAGCTAAAATCCTTTGGAGTGGAGCTGGACAACTTGGTTAGCCTTCGAATCTTGGACTTGCAAAACAATAGCCTCCAAGGATTGGTTCCTGATAGCTTGGGAGAGTTAGAAAACCTCCATTTTCTGAATCTGGAAAACAACAAGCTACAAGGTCCACTACCAGAGTCCTTGAACAAAGCAACCGTAGAGATCAGAACATCTGGGAATTTGTGTCTTTCATTCTACGCAGCCATATGCGATGATGCATCATTCGCTCCTTCAATTGAGACACCACAAGTTACAATAATTCCCAGAATGAAGCACAAAACGCATAGACATCTTGCAATCATACTAAGCTTGGTTGGCGGAGCCACACTTGTGTTTTTGTTTATCTTTCTTTGGGTACTGCTACACATGACTAAAAAGAGATATGAAATCTCTCACACAGCAAGAGTAGAAATTAATATGAGGAACTGGGGCGCAGCAAAAGTGTTTTCCTACAAAGAAATCAAAGTAGCTACTGGAAACTTTAAAGAAGTTATAGGAAGAGGCAGTTTTGGATCAGTTTACCATGGAAAGCTTCCAGATGGTAAATCAGTCGCTGTCAAAGTTCGGCTGGACAAAACCCAACTAGGAGCTGATTCTTTCATCAATGAGGTTCACCTTTTGTCAAAAATCCGCCATCAAAATCTGGTGTCATTGGAAGGATTTTGTCATGAATCAAAGCATCAGATACTAGTGTACGAGTATTTGGCCGGTGGATCACTAAATGATCACCTTTATGGTACAAACAGCCAAAAAAGGTCATTAAGCTGGGTTCGAAGATTGAAAATAGCAGTTGATGCAGCAAAAGGACTGGATTATTTACATAATGGAAGTGAACCACGAATCATACACCGTGACGTCAAGTGCAGTAACATCCTCTTGGATATGGAGATGAACGGAAAGGTCTGTGACTTTGGTCTCTCCAAGCAAGTAACCAAGGCAGATGCAACTCATGTCACCACTGTTGTCAAGGGCACTGCTGGCTATCTAGACCCTGAGTATTATTCCACCCAACAGCTCACTGAGAAAAGTGATGTATATAGCTTTGGTGTTGTTCTTTTGGAACTCATCTGTGGCAGAGAGCCATTGAATCACTCTGGGTCTCCTGATTCTTTCAATTTGGTGTTATGGGCAAAGCCTTACTTGCAGGCAGAAGCATATGAAATTGTGGATGAAAGCATAAAAGGAAATTTTGATCTGGAGAGCATGAGGAAGACAGCCTCCATTGCTGTGAAGTCAGCGGAAAGGGATGCATCACTGAGACCAACTATTGCAGAAGTATTAGCTGAACTAAAAGAAGCATATGAGATTCAGCTCAGATATCTTGAGTCTCGGTGA 2700 0.4204 MEFWDLRVGFFLLYSFWVGVFCDQDGFLSLSCGGRTSFNDSSNISWTPDTAYISTGTTAISYNDNDSSSYVSLRFFPDSQGRKCYKLPLTNVTSLVLVRAKFVYNNYDGLEHPPTFSVSLGTAIAAIVNLTKDDPWTEEFLWTVNTDTLPFCLLAASHGGFPVISSLEIRPLPPGAYTNGMEYFSNKLLRKSYRIDCGYTNESIRYPLDPYDRIWDADRSFAPFHVATGFKVQLTFNQSSLMEKPPAAVLQSGRVLARRNLLTYNLPLDAVGDYYIILYFAGILPVFPAFDVFINGDLIKSNYKIKSSEISALYVTRKGIGSLNITLKSISFYPQINAFEVYQMVDIPSEVSSTTVSALQVIQQSAGLDLGWQDDPCSPSPWDHIGCEGSLVTSLDLSGVNFRSITPTFGDLLDLKKLDLHNASLAGEIQNLGSLQHLEKLNLSFNQLKSFGVELDNLVSLRILDLQNNSLQGLVPDSLGELENLHFLNLENNKLQGPLPESLNKATVEIRTSGNLCLSFYAAICDDASFAPSIETPQVTIIPRMKHKTHRHLAIILSLVGGATLVFLFIFLWVLLHMTKKRYEISHTARVEINMRNWGAAKVFSYKEIKVATGNFKEVIGRGSFGSVYHGKLPDGKSVAVKVRLDKTQLGADSFINEVHLLSKIRHQNLVSLEGFCHESKHQILVYEYLAGGSLNDHLYGTNSQKRSLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMEMNGKVCDFGLSKQVTKADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLNHSGSPDSFNLVLWAKPYLQAEAYEIVDESIKGNFDLESMRKTASIAVKSAERDASLRPTIAEVLAELKEAYEIQLRYLESR 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2109 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Prci13g2109 899 Gene3D Ribonuclease Inhibitor 354 526 IPR032675 -
Prci13g2109 899 SMART serkin_6 614 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2109 899 Pfam Leucine rich repeat 437 495 IPR001611 GO:0005515
Prci13g2109 899 Pfam Protein tyrosine and serine/threonine kinase 616 884 IPR001245 GO:0004672|GO:0006468
Prci13g2109 899 SMART LRR_typ_2 435 457 IPR003591 -
Prci13g2109 899 SMART LRR_typ_2 482 506 IPR003591 -
Prci13g2109 899 SMART LRR_typ_2 458 481 IPR003591 -
Prci13g2109 899 SUPERFAMILY Protein kinase-like (PK-like) 594 885 IPR011009 -
Prci13g2109 899 CDD STKc_IRAK 620 887 - -
Prci13g2109 899 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 690 897 - -
Prci13g2109 899 ProSiteProfiles Leucine-rich repeat profile. 437 459 IPR001611 GO:0005515
Prci13g2109 899 FunFam serine/threonine-protein kinase PBS1-like 582 689 - -
Prci13g2109 899 ProSiteProfiles Protein kinase domain profile. 614 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2109 899 Gene3D - 191 346 - -
Prci13g2109 899 PANTHER OS07G0107800 PROTEIN-RELATED 454 889 - -
Prci13g2109 899 SUPERFAMILY L domain-like 358 507 - -
Prci13g2109 899 Gene3D Transferase(Phosphotransferase) domain 1 690 895 - -
Prci13g2109 899 Gene3D Phosphorylase Kinase; domain 1 577 689 - -
Prci13g2109 899 Pfam Malectin-like domain 30 344 IPR024788 -
Prci13g2109 899 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2109 Prci-Chr13 36080085 36087199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2109 1 898 Receptor kinase-like Gene Family AT5G48740 62.403 0.0 1098
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g2109 Malectin_like 1.2e-54 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2109 - - aprc:113850446 1419.45