Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2079 ATGGCCTCACCTCCCTCACCTAAACCCTTCTCCCCACTCACCAACACCGCCTCGCCCTCCAAGAAACCCCAATCAATTCCATGGACCCATCAAGAAACAATCAATCTCATCCAAGCATACCAGGAGAAATGGTATTCCCTCATGCGAGGTCCTCTCAAGGCCAACCAGTGGGAAGAGGTCGCCGTTACAGTCGCCGTCCGATGCGGCTACAATGAGCCTTCCAAGACCGCCGTCCAGTGCCGCCACAAAATGGAAAAGCTCCGTCAACGTTATCGTGCCGAGAACCAACGTCTCACTGCTTTCTCCAGTGGCGGTCGCGTTTGGCAATACTTTGACCTCATGGACCAATTAGAGAAAGGCCCTATGCCTATTTCTGCCCAACCCCTTGTGGCATTCATGCCGTTTGATTGTGATGATAATGAGGAGGAAAATGACGTTGACGTTGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGAGCAGATTGATGAGAGACAGCAGTATAGCCAGTTAAGGACTACTAATTATTTTCTCAACCAGCGACCTGAAAACAAGTATAAAGTTCCTGAATTTTCTCGAGGACAAGTAGCTAAGAGGATACGGAGGATCGCCGAAGAGGAAGAAGAGGAAGAGGTCGAAGAGAATGTCGAGGAGGTAAATGGTGAGAGAATTGTGAAAGGAATGGGATTGGTTTCTGGGTTGGCTGCAGAGATGAAGGCTTTTGCAGAAAGGTTTATTGGGATGGAGAATTTGAAAATGGAGATGATGAAGGAAACTGAGAGGTGTAGGTTGGAGATGGAGAATAAGCGCATAGAGATGATTGTAAAATCGCAGCAGAGAATTGTTGATTCAATTGGGAAGGCTTTTGGGTTCCCTAAGAGGATGAAGATAAGTCCTGAAATCTAA 906 0.4757 MASPPSPKPFSPLTNTASPSKKPQSIPWTHQETINLIQAYQEKWYSLMRGPLKANQWEEVAVTVAVRCGYNEPSKTAVQCRHKMEKLRQRYRAENQRLTAFSSGGRVWQYFDLMDQLEKGPMPISAQPLVAFMPFDCDDNEEENDVDVDDDDEEEEEEEEQIDERQQYSQLRTTNYFLNQRPENKYKVPEFSRGQVAKRIRRIAEEEEEEEVEENVEEVNGERIVKGMGLVSGLAAEMKAFAERFIGMENLKMEMMKETERCRLEMENKRIEMIVKSQQRIVDSIGKAFGFPKRMKISPEI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2079 301 Coils Coil 77 97 - -
Prci13g2079 301 MobiDBLite consensus disorder prediction 136 166 - -
Prci13g2079 301 ProSiteProfiles Myb-like domain profile. 27 88 IPR001005 -
Prci13g2079 301 MobiDBLite consensus disorder prediction 13 27 - -
Prci13g2079 301 SMART 118neu2 35 122 IPR006578 -
Prci13g2079 301 Pfam Myb/SANT-like DNA-binding domain 27 117 IPR044822 -
Prci13g2079 301 Coils Coil 202 222 - -
Prci13g2079 301 MobiDBLite consensus disorder prediction 1 27 - -
Prci13g2079 301 FunFam Trihelix transcription factor ASIL2 28 93 - -
Prci13g2079 301 MobiDBLite consensus disorder prediction 136 163 - -
Prci13g2079 301 Gene3D - 28 93 - -
Prci13g2079 301 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 285 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2079 Prci-Chr13 35895671 35897461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2079 28 117 Trihelix Transcription Factor Family AT3G14180 36.264 2.16e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci13g2079 Myb_DNA-bind_4 2.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2079 - - pcin:129290421 537.724