Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2069 ATGGAAAGTCGCCCGAGAATGACGCTTTATGATCAAATGTCTGCCGTTGACGGCCGCAGAGACTCGCTTGCCGGTTCGACCCTCGAAGCCGCGATGGCAAGCCACAAGATAGCATCCGAGCCGAGCCGCCGCCAGTTTAACAGCAGCCGAACCCTCTCGGATATTATTCGAGAAGATAATTCCAACACAAGGGACAAGAAGTCTTGGAAGATCTTCAAAGACAAGCTCTGGCTCAAGCGCGCCGGATCTGCTTGGTTCTCCGCAATTCACATCCCGGCTCTGGATATCTCTATCCCTAACCGGAATAACAGCAACTCGGACGCCCCATCCACCAGTAACCCACCCGAATTCTTAGGCCAGATCTTAAACCAAGCACGATCTTCCCCCAACGATGCCTTCTCCGGCGAGTCAATTCACCAAACTTCGCGCCTCGATTCCTTCCGTCGAGACGGCGCCGTGACTTTCCAGGATTGCCTGGACAGCGACGACGGATCCGAGTGCGACGACTGGGATCCGGCGCGTGAAGGCACGCGCCGCCTATCCACGATTTTATCAGAGGAGAGAGCATTGTCCGCGAGAGAAGCAGAGGCCGCCGCCGCCACCGCTGCATCGGCGGCAGCACAGGGGGAAGACGAGCCGGTGAGAATGTCGCTGACGCTGATGGATTTGCTAGAGGAGACAGACAGGCAAATGGGGTTCGATGCATCACAATACAGAACAGGATATGAAGATGATGACGAAGAAGTGTATCAGAGAGTGAAAGTGGAGAAGGAAGAGGACGAAGACGAAGAAGAAGAAGAAAGCAAACAGTGGAGCATACAGGAAAACTGTTGCGTGTGTATGGTGAGGCATAAAGGAGCAGCGTTTATACCTTGTGGACACACATTTTGCAGACAGTGTTCGAGGGAGCTTTGGGTGAGTAGAGGCCATTGTCCGCTCTGCAACAATGTTATTCTGGAAATTCTTGACTTGTTCTGA 978 0.5327 MESRPRMTLYDQMSAVDGRRDSLAGSTLEAAMASHKIASEPSRRQFNSSRTLSDIIREDNSNTRDKKSWKIFKDKLWLKRAGSAWFSAIHIPALDISIPNRNNSNSDAPSTSNPPEFLGQILNQARSSPNDAFSGESIHQTSRLDSFRRDGAVTFQDCLDSDDGSECDDWDPAREGTRRLSTILSEERALSAREAEAAAATAASAAAQGEDEPVRMSLTLMDLLEETDRQMGFDASQYRTGYEDDDEEVYQRVKVEKEEDEDEEEEESKQWSIQENCCVCMVRHKGAAFIPCGHTFCRQCSRELWVSRGHCPLCNNVILEILDLF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2069 325 Coils Coil 250 270 - -
Prci13g2069 325 ProSiteProfiles Zinc finger RING-type profile. 277 315 IPR001841 -
Prci13g2069 325 CDD RING-HC 277 314 - -
Prci13g2069 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 325 IPR013083 -
Prci13g2069 325 Pfam Zinc finger, C3HC4 type (RING finger) 274 319 - -
Prci13g2069 325 SMART ring_2 277 314 IPR001841 -
Prci13g2069 325 SUPERFAMILY RING/U-box 276 321 - -
Prci13g2069 325 PANTHER OS01G0917900 PROTEIN 8 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2069 Prci-Chr13 35852122 35853913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2069 4 325 C3H Transcription Factor Family AT3G25030 39.514 2.91e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2069 - - pcin:129290516 589.726