Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2050 ATGGATCTCCTCTCTATCCTAACACTAACAGCAATCGTAACCCTACTTTTGTCCCTACTTGTATGGATCAGAGCTCAGAAAAACTCACCAAATCACACAGCCAAAGGCATGGTAGCACCAGAACCTTCCGGAGCCTTACCCTTAATAGGCCATCTTCATCTTCTTGGAGCTCAAGCTCCTCTCGCCCACACCTTAGGTTCTTTTGCAGACAAGTACGGCCCCATCTTCACCCTCCGTCTCGGAGCCTTCCCTGCTCTCGTCGTTAGCAGCCAAGACGCCATTAAAGACTGCTTCACCACCAACGACAAAACCCTAGCCGCTCGCCCAAGGTCCAGCCATGGCGTCTACCTCAATTACAACTATGCCTCATTCGGGTCTGCGCCAGACGGCCCGTATTGGCGCAAATTGAAGAAGCTCATCATGCTCGAGCTCCTGTCAACTCGAAGACTCGAATCGTTGAGGCATATATATGAAAGTGAGATTTATGATTTCATCAGTGACTTGTACTCGTATCTCGGAGATGGTAATAAGGGTAAGGTTGTGATTAGCGAGTGGTTGGAGAGATTGACTCTGAACATAATCACGAGGATGATTGCAGGGAAGAGGTATTTTGGGAATTTGAAGGATGTGGATGATGAAGAGGCACGTAGGGTTGTGAAGCTTATAAAGGATTTTATGCATATTTCTGGGGACTTTGTTCCTTCAGATTTGATTCCGTTTCTGGGATGGTTTGGTGGTGAAGGGAAAGTTTTTAGATCGATGAAGAAGATTGCAAATGATTTGGATTGTCTTGCGTCGAGTTGGATTGAAGAGCATCGTGTGAAGAAGAAAGAGTTCAGTGAGAAGCAGGATTTCATTGACTTGATGCTTTCTGTGATTGAAGACGACGAGTACTCTACCTTTGGCCATGCACGTGACACCATCATCAAAGCAAATGTTCTTAATTTGATCTTAGCTGGAGCAGACACAACCTCCATCACCTTGACATGGATCCTATCATTATTGGTGAACAATAAGCACGTCCTGAAGCTTGCCCAGGAGGAGATTGATCGTCACGTAGGCAAGAAAAGATGGGTCCAAATCTCAGATATCAAAAACCTAATTTACCTTCAAGCCATTCTCAAAGAAACCCTAAGATTATACCCTCCAGCTCCTCTCTTAGTCCCTCATGAAGCAACCCAAAACTGTTATATTTGCGGCTATTACGTCCCAAAAGGCACCAGAGTGTTTGCCAACATATGGAAACTCCATAGAGACCCGACCATTTGGTCGCAGCCTGAAAGATTCATGCCTGAGAGGTTCATTACAGAGAAAGGAGATATTGATCATGAAGGTCACCATTTTCAGTACCTTCCTTTTGGGCTTGGGAGAAGGGCTTGTCCTGGTTCGAGTTTAGCAATGCAAGTGAGTGTGTTGACTCTTGCTCGTTTGCTTCAAGGGTTTGAGTTGGAGAGCGTAGGTCATGAACCAGTGGACATGAAAGAAGGTGCCAGCTTTACTTTGCCGAAGGCAATTCCATTGGAGGTTGTGCTAACTCCACGTCTTTCGTCTCATCAATATCAGATGTTATTGTCCAATAATTCTTAA 1587 0.4524 MDLLSILTLTAIVTLLLSLLVWIRAQKNSPNHTAKGMVAPEPSGALPLIGHLHLLGAQAPLAHTLGSFADKYGPIFTLRLGAFPALVVSSQDAIKDCFTTNDKTLAARPRSSHGVYLNYNYASFGSAPDGPYWRKLKKLIMLELLSTRRLESLRHIYESEIYDFISDLYSYLGDGNKGKVVISEWLERLTLNIITRMIAGKRYFGNLKDVDDEEARRVVKLIKDFMHISGDFVPSDLIPFLGWFGGEGKVFRSMKKIANDLDCLASSWIEEHRVKKKEFSEKQDFIDLMLSVIEDDEYSTFGHARDTIIKANVLNLILAGADTTSITLTWILSLLVNNKHVLKLAQEEIDRHVGKKRWVQISDIKNLIYLQAILKETLRLYPPAPLLVPHEATQNCYICGYYVPKGTRVFANIWKLHRDPTIWSQPERFMPERFITEKGDIDHEGHHFQYLPFGLGRRACPGSSLAMQVSVLTLARLLQGFELESVGHEPVDMKEGASFTLPKAIPLEVVLTPRLSSHQYQMLLSNNS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2050 528 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PANTHER CYTOCHROME P450 82C3-RELATED 16 520 - -
Prci13g2050 528 FunFam Cytochrome P450 82C4 29 512 - -
Prci13g2050 528 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 CDD CYP82 73 514 - -
Prci13g2050 528 SUPERFAMILY Cytochrome P450 40 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 Pfam Cytochrome P450 40 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Prci13g2050 528 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2050 528 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2050 Prci-Chr13 35672549 35676034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2050 10 520 Cytochrome P450 AT4G31940 47.893 3.82e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2050 - - gmx:100790675 649.432