Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2038 ATGGCTTTTGCTTCCTTGTCTCAATTTTGTTCCATATACCTTCAAGCAATCATTTCTCTGTGTGTGAACTTAATCTGGCTTCAAAATATCAGTGCTGCATCTGCATCAGGAAATGAGACTGACTATATGGCATTGCTCAAGTTTAAAGAATCAATAGCCAATGATCCATTTGAAGCCTTGAGCTCCTGGAATAGTTCAAGTCACCTCTGCAACTGGCATGGAATCACATGCAGCCAAAAGCACCAAAGAGTCATTGAGTTGAGGCTGCCCGGATATCATTTGCGTGGGGTCCTCTCACCCCATGTTGGCAACCTCTCTTTCCTGAGAAACCTCTACCTTCCAAATAACAGCTTCTATGGAGAAATCCCACCAGAATTGGGTCATTTGTTCAGACTACAGAAACTCTCTCTCAGAAATAATATGTTGACAGGAGAGATTCCACTCAGCCTGACAAACTGCACTGAACTACAGCACGTAAATTTGTCAAGCAATAGTCTTACAGGTAAAATACCATTTGAGATTGGCTCTCTCAGGAAGCTTGAAAAGTTGAACTTATTTACCAACAATTTAACTGGAGAAATCCCAGCTTCCATGTGGAATCTTTCCTCTCTTAATGTTCTTTCGGTGGCTTTTAACAACTTGGAGGGGATCATACCAGAAGAAATAGGCCATTTGAAAAGCTTGAGTGTTTTATCAATAGTTGAGAACAAATTTTTTGGTATGCTTCCTTACTCATTCTATAATATGTCATCTCTCACATTCATATCTGCAGCAAATAACCAACTGAGTCGCACTAAGCTTCCAGACAACATGTTCACCACCCTCCCTAATTTGCAATCTTTTGGCATAGGTGGGAATCAAATATCAAGTTCGATACCAACTTCAATAACAAATGCAACCTTTCTTCAACTATTTGACATTGGTGTAAACAACTTTTTTGGAGAAGTTCCAAGCCTAGGAAGCCTAAAAGACTTGCAGTGGTTAAATTTGAACTATAATAATCTTGGAAATAGTTCAAATCATGACTTGGATTTTATATCATCTTTGGAAAATTGTACCAAACTAGAAAATTTGATTCTTTCCACCAATAGATTCGGAGGTCTTTTACCCGACTCCATAAGTAATTTGTCAACCCAACTCATACGACTGTACCTTGGTGATAATCAGATATATGGAACTATTCCTGAAACTTTAGGAAGGTACACGAATTTAATTGCGTTGGTGCTGGAATACAACCAGTTTACAGGCTCAATTCCAGCTTCTTTTGGAAAGTTTCATGAGTTGCAAATATTAGGCTTGGGGAGAAACCAACTCTCTGGTGAGATACCAGCCTCCTTGGCCAATCTCAGTCAATTGGTTCAACTAAGCTTTTCACAGAATATGCTTGAAGGAAAAATTCCACCAGTGATAGAAAGTTGGCAAAATATAGTCTTTCTGGACCTTTCAGAAAACAATCTTAGTGGTGCTATACCCTTGCAGGTTTTTAGTCTGTTCTCCTTGTCCACATTGCTGAACTTATCTCACAACTCATTAAACGGCTCTCTTCCTATTGAGGTGGGAAAACTTAAAAATATTGGCACTTTTGATATTTCTGAAAATTATCTTTCTGGGGAGATTCCTCGGACCATAGGTGACTGTACAAGTTTGGAATACCTTAGCTTACAGGGGAATTCGTTCAATGGCTCCATGCCCCCTTCACTAGCTTCACTAAAAGGCCTTAAGTATCTTGATCTATCACACAACAACTTGTCTGGATCAATACCAAAAGGTCTACAGAATATTTCCATTCTTGAATACCTGAATGTTTCATTTAATGCGTTGGATGGTGAAGTTCCCACAGATGGGGTTTTCAAGAATGCAAGTGCCATATTTGTTGCGGGTAATTATAAGCTTTGTGGGGGTATTTATGAGTTGCATTTACCACCATGCCCTTTCAATATTAGGACAAAAAGTAAACATCTTCATTTGAAGCTTTTGGTTATTATTATTTGTGTTGCTGTTTGTCTTGTGCTAGCATCTATATCTGCTATCTACTGGTGGAGGAAACGAAACAGGATATTGTCTTCTACTTCACAACCAATTGACCAGCTCTCCAAGTTGTCATACCAGAGATTACACTCTGCCACTGAAGGGTTCTCTTCCAAGAACTTGATTGGATATGGAAGTTCTGGTTTTGTGTATAAAGGAATGCTGCAATCAGAAGACAAAGTTGTTGCTATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTTCTGAATGTAATGCACTTAAAAATATCAGGCATCGAAATTTAGTTAAGGTTTTAACATGCTGCTCCAGCTTAGATTATAAAGGGCAAGAATTTAAAGCCTTGGTCTTTGAGTACATGTCAAATGGAAGCTTGGAAGAATGGTTGCATCCAAGTCCAGGAAGTATAGATCAGACTAGAACTTTGAATTTCACTAAAAGATTAAGTATTCTAAATGATGTTGCTTGTGCCCTACATTATCTTCATTATGAATGTGAGAAAACTATTGTCCATTGTGACTTAAAGCCAAGCAATATTCTTCTTGATGATGATATGGTTGCTCATGTAAGTGACTTTGGGTTAGCAAGACTTCTCTCAATCCTTAGTGGCAGTTCTCAGAAGCAAAGCAGCACAGTTGGAATAAAAGGCACTATTGGCTATGCTCCTCCTGAGTATGGAATGGGTTCTGAGGTATCAACACAAGGTGATGTTTATTCTTTTGGGATTCTGGTTTTGGAAATGCTTACTGGCAAAAGACCCACTGAGGAAATGTTCAAAGATGGCCACAATCTCCATAACTATGCAAAAACTGCATACCCAGATAACATCGTGGACATCGTAGACTCAGCTCTTCTGTCAAAAGAAATAAAGCAGACTGCAACAGCAAGATCAGAGAAAATAAACATGGAAAACCAGACCCTGATCTCACTATTTAGCATTGGACTTGCTTGCTCAGAAGAAACACCAAAAGAAAGAGCGAACATGATGAATACCACAAGGAGACTAAATCTGATTACTACTGCCTTTTGTGGCCACGGAAATTGA 3066 0.3888 MAFASLSQFCSIYLQAIISLCVNLIWLQNISAASASGNETDYMALLKFKESIANDPFEALSSWNSSSHLCNWHGITCSQKHQRVIELRLPGYHLRGVLSPHVGNLSFLRNLYLPNNSFYGEIPPELGHLFRLQKLSLRNNMLTGEIPLSLTNCTELQHVNLSSNSLTGKIPFEIGSLRKLEKLNLFTNNLTGEIPASMWNLSSLNVLSVAFNNLEGIIPEEIGHLKSLSVLSIVENKFFGMLPYSFYNMSSLTFISAANNQLSRTKLPDNMFTTLPNLQSFGIGGNQISSSIPTSITNATFLQLFDIGVNNFFGEVPSLGSLKDLQWLNLNYNNLGNSSNHDLDFISSLENCTKLENLILSTNRFGGLLPDSISNLSTQLIRLYLGDNQIYGTIPETLGRYTNLIALVLEYNQFTGSIPASFGKFHELQILGLGRNQLSGEIPASLANLSQLVQLSFSQNMLEGKIPPVIESWQNIVFLDLSENNLSGAIPLQVFSLFSLSTLLNLSHNSLNGSLPIEVGKLKNIGTFDISENYLSGEIPRTIGDCTSLEYLSLQGNSFNGSMPPSLASLKGLKYLDLSHNNLSGSIPKGLQNISILEYLNVSFNALDGEVPTDGVFKNASAIFVAGNYKLCGGIYELHLPPCPFNIRTKSKHLHLKLLVIIICVAVCLVLASISAIYWWRKRNRILSSTSQPIDQLSKLSYQRLHSATEGFSSKNLIGYGSSGFVYKGMLQSEDKVVAIKVLNLQKKGAHKSFISECNALKNIRHRNLVKVLTCCSSLDYKGQEFKALVFEYMSNGSLEEWLHPSPGSIDQTRTLNFTKRLSILNDVACALHYLHYECEKTIVHCDLKPSNILLDDDMVAHVSDFGLARLLSILSGSSQKQSSTVGIKGTIGYAPPEYGMGSEVSTQGDVYSFGILVLEMLTGKRPTEEMFKDGHNLHNYAKTAYPDNIVDIVDSALLSKEIKQTATARSEKINMENQTLISLFSIGLACSEETPKERANMMNTTRRLNLITTAFCGHGN 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2038 1021 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 40 150 - -
Prci13g2038 1021 FunFam LRR receptor-like serine/threonine-protein kinase EFR 683 793 - -
Prci13g2038 1021 PRINTS Leucine-rich repeat signature 570 583 - -
Prci13g2038 1021 PRINTS Leucine-rich repeat signature 476 489 - -
Prci13g2038 1021 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 649 - -
Prci13g2038 1021 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 267 1004 - -
Prci13g2038 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Prci13g2038 1021 Gene3D Ribonuclease Inhibitor 193 340 IPR032675 -
Prci13g2038 1021 SMART LRR_typ_2 129 153 IPR003591 -
Prci13g2038 1021 SMART LRR_typ_2 425 449 IPR003591 -
Prci13g2038 1021 SMART LRR_typ_2 225 248 IPR003591 -
Prci13g2038 1021 SMART LRR_typ_2 497 522 IPR003591 -
Prci13g2038 1021 SMART LRR_typ_2 249 274 IPR003591 -
Prci13g2038 1021 SMART LRR_typ_2 275 299 IPR003591 -
Prci13g2038 1021 SMART LRR_typ_2 570 593 IPR003591 -
Prci13g2038 1021 SMART LRR_typ_2 177 201 IPR003591 -
Prci13g2038 1021 ProSiteProfiles Protein kinase domain profile. 712 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2038 1021 SUPERFAMILY L domain-like 378 633 - -
Prci13g2038 1021 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524
Prci13g2038 1021 Gene3D Transferase(Phosphotransferase) domain 1 794 1016 - -
Prci13g2038 1021 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 151 246 - -
Prci13g2038 1021 Gene3D Ribonuclease Inhibitor 341 644 IPR032675 -
Prci13g2038 1021 Gene3D Phosphorylase Kinase; domain 1 674 793 - -
Prci13g2038 1021 Pfam Leucine rich repeat 568 607 IPR001611 GO:0005515
Prci13g2038 1021 Pfam Leucine rich repeat 203 262 IPR001611 GO:0005515
Prci13g2038 1021 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 794 1020 - -
Prci13g2038 1021 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Prci13g2038 1021 Pfam Protein kinase domain 713 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2038 1021 SMART serkin_6 712 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2038 1021 Gene3D Ribonuclease Inhibitor 38 192 IPR032675 -
Prci13g2038 1021 SUPERFAMILY L domain-like 38 335 - -
Prci13g2038 1021 SUPERFAMILY Protein kinase-like (PK-like) 692 1009 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2038 Prci-Chr13 35504284 35508305 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2038 38 999 Receptor kinase-like Gene Family AT3G47570 46.170 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci13g2038 Pkinase 6.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2038 - - qsa:O6P43_025027 1176.39