Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2034 ATGTATCTAAACTTGTTTTGTTTACATGTCAAAGCACCATCAAACGAGACCGATTATTTGGCCTTGCTCAAGTTTAAAGAATCAATATCTGATGATCATGAAGAAGTCTTGAGCTCTTGGAATAGTTCGAATCACTTTTGCACCTGGACAGGAATCACATGCAGCCTCAAGCATCAACGAGTCACAGAGTTGAATCTGCGAGGTTATCATCTGAGTGGGTTCATATCGCCTTATGTTGGCAATCTCTCCTTCTTGAGGAATCTCTTCCTCAATGACAATAGTTTCAATGGAGAAATCCCACCAGAGATGGGACGTTTGTTCAGGCTGAGACGTCTCTCTCTTGGGAACAAATTGACAGGAGGGATTCCTTGGAACCTGTCGAGCTGCACTGAACTGAGGCGCTTGAATTTGTCATGGAATAGTCTTACAGGTAAAATTCCAGTTCAACTTGGCTTACTTGAGAAGCTTGAAATGTTGCTTATTTCCAAAAACAAGTTAACTGGAATAATTCCTTCTTCTATATGGAACCTTTCCTCTCTCCAAAATTTTGAAGCTGCTCATAATTACTTGGAAGGAAACATAGCTGAAGAGATAGGTCATTTGAAGAGCTTGAGAGGTTTAAATGTAGGCACTAATAATTTGTCTGGCAGCCTGCCTTCCTCACTTTACAACATGTCATCTCTTACTTATATAGTGGTTGCAATGAACCATCTAAATGGCACTCGGCTTCCGAACAACATGTTCTCCACCCTCACAAATTTGCAAATTTTTGGCATAGCTGGGAATCAAATTTCAAGTTCAATTCCAAATTCCATCACAAATGCATCATCTCTCCAAATTTTTGATATTCCTATTAACTACTTTAGGGGAAAAGTTCCTAATCTATGGAACATGAAAGATTTGAGTTGGCTCGATTTAGAACTTAACAATCTAGGCAGCAGTTCAAATGACGACTTGAATTTCATATCATCTTTGAAAAATTGCAGCAAATTGGAAAAGTTATCTCTAGCCTGGAACAAATTTGGGGGTGTTTTACCCAACTCCATAGGAAATTTGTCAACCCAACTCACTCAACTGAACCTTGGAAGGAATGAGATATCTGGAACTGCACCTGGAAATCTAGGAAAGTGCACAAATTTAATTCTCTTGAATCTTGAATTCAACAAATTTTCAGGCAACATTCCAACTTCTTTTGGAAATTTTCATGAGATGCAAGTGTTGACTTTTGAGGGAAATGAATTCTCAGGAGAGTTTCCAATATCCCTGGGAAATCTTAGCCGATTGTATTTGCTAATTTTGTCTGACAACATGCTTGAAGGAAAAATCCCCCCTATGATTGGAGGCATGAAAAATTTACAACATTTGGACCTTTCCAAAAACAACTTCACGGGATCCATACCCTTGCAGATTTTTGGTCTTCCATCCTTGTCCATTTTATTGAACTTATCTCACAACTCATTGAATGGTGCTTTGCCTATAGAGGTAGGGACCCTTAAAAACCTCAACAACTTGGATTTCTCTGAAAATCATCTCTCTGGTGAGATTCCTTCTACCATAGGAGAGTGTACTAGTATGGAATACCTTAATTTACAAGGGAATTCCTTCAATGGCCCCATGCCTTCTTCACTAGTTTCTTTGAAAGGTCTTGTCCATTTAGATATGTCACGAAACAACTTGTCTGGGCCAATATTAGCTAGCTTACAGGACCTTTCTTTTCTTCAATACTTGAATGTTTCTTTCAATATGTTGGAGGGTGGGGTACCAACAAAAGGGGTTTTCAGTAATAATAGTGCAGTATCGGTGATGGGAAATATGAAGCTTTGTGGGGGCATCTCTGTACTGCACTTACCACAATGCCCTGTCAAAAAGAACCACAATTTGAAGCTCACAATAATAATTATTTGTGTAGCATTTTCTATTCTAGTGATATTTGTTCTTGCTTTATATTGGTGGCGAAAAAGAAGTAAGAAATCAGCTTCAGCTTCACCAACAATCGAACAACTTTCCAAGATGTCATATCAAGATCTACACTTTGCAACTGAAGGCTTCTCTACCAACAACTTGATTGGATCCGGGAGTTTTGGCACAATATATAAAGGAAGGCTACATTCAGAAGATAAAATTGTTGCCATAAAGGTATTGAATCTTCAAGTGAAAGGAGCAGAAAAGAGTTTCATTTCAGAATGCAATGCCTTAAAAAACATAAGGCATCGAAATTTGGTTAAAATTCTAACATGTTGCTCGAGCACTAATTTCAAGGGACAAGAATTTAAAGCACTTGTGTTTGAGTTCATGCCAAATGGAAGCCTAGAAAATTGGCTGCATCTTAATCTAGGAACTGCAGATCAATGTCCAACATTAAATCTTGGTGAAAGATTAAATATTATAAATGACGTTGCCTCTACATTGCACTATCTTTATCATGAGTGTGAGCAACCAATTGTTCATTGTGATATAAAGCCAAGCAATATCCTTCTTAATGATAATTTGGTGGCTCACTTGAGTGATTTTGGATTAGCAAGACTTCTTTCAAGCATCAATGGCACTACTTTTAAGAAAACCAGCACAACTGGAATAAAAGGGACTATTGGTTATGTTCCTCCAGAGTATGGAATAAGTTTTGAGATTTCAACCCAGGGTGATGTATATTCTTTTGGCATTCTCATTTTGGAAATGTTAACTGGAAGAAAACCCACAGATGAAATGTTTAAAGATGGCCATGATCTCCATAGCTATGTGAAAGCTGCATATCCAAATAACCTTTTGGATATTGTGGACTCTGCTCTTGATCAAACAAGAACAACAACAGGAGAAGAAATTAGGATGGATGAGTTGAGTCTTCTGCATCATAGTAATCATGAGAAGACTATATTTTCATTATTTGAGATTGGACTTGCTTGCTCAGTCAAATCACACAATGAGAGACTGAACATGATGGATGTTACTAGGAAGCTAAATCAAATTAGTACTTGTTGTTTCAATAAAAGAAAAGGATGA 2997 0.376 MYLNLFCLHVKAPSNETDYLALLKFKESISDDHEEVLSSWNSSNHFCTWTGITCSLKHQRVTELNLRGYHLSGFISPYVGNLSFLRNLFLNDNSFNGEIPPEMGRLFRLRRLSLGNKLTGGIPWNLSSCTELRRLNLSWNSLTGKIPVQLGLLEKLEMLLISKNKLTGIIPSSIWNLSSLQNFEAAHNYLEGNIAEEIGHLKSLRGLNVGTNNLSGSLPSSLYNMSSLTYIVVAMNHLNGTRLPNNMFSTLTNLQIFGIAGNQISSSIPNSITNASSLQIFDIPINYFRGKVPNLWNMKDLSWLDLELNNLGSSSNDDLNFISSLKNCSKLEKLSLAWNKFGGVLPNSIGNLSTQLTQLNLGRNEISGTAPGNLGKCTNLILLNLEFNKFSGNIPTSFGNFHEMQVLTFEGNEFSGEFPISLGNLSRLYLLILSDNMLEGKIPPMIGGMKNLQHLDLSKNNFTGSIPLQIFGLPSLSILLNLSHNSLNGALPIEVGTLKNLNNLDFSENHLSGEIPSTIGECTSMEYLNLQGNSFNGPMPSSLVSLKGLVHLDMSRNNLSGPILASLQDLSFLQYLNVSFNMLEGGVPTKGVFSNNSAVSVMGNMKLCGGISVLHLPQCPVKKNHNLKLTIIIICVAFSILVIFVLALYWWRKRSKKSASASPTIEQLSKMSYQDLHFATEGFSTNNLIGSGSFGTIYKGRLHSEDKIVAIKVLNLQVKGAEKSFISECNALKNIRHRNLVKILTCCSSTNFKGQEFKALVFEFMPNGSLENWLHLNLGTADQCPTLNLGERLNIINDVASTLHYLYHECEQPIVHCDIKPSNILLNDNLVAHLSDFGLARLLSSINGTTFKKTSTTGIKGTIGYVPPEYGISFEISTQGDVYSFGILILEMLTGRKPTDEMFKDGHDLHSYVKAAYPNNLLDIVDSALDQTRTTTGEEIRMDELSLLHHSNHEKTIFSLFEIGLACSVKSHNERLNMMDVTRKLNQISTCCFNKRKG 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2034 998 FunFam Leucine-rich repeat receptor protein kinase EMS1 125 221 - -
Prci13g2034 998 Pfam Leucine Rich Repeat 451 467 IPR001611 GO:0005515
Prci13g2034 998 Pfam Leucine Rich Repeat 330 352 IPR001611 GO:0005515
Prci13g2034 998 Pfam Leucine Rich Repeat 132 147 IPR001611 GO:0005515
Prci13g2034 998 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 765 997 - -
Prci13g2034 998 Gene3D Transferase(Phosphotransferase) domain 1 765 996 - -
Prci13g2034 998 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Prci13g2034 998 SUPERFAMILY L domain-like 14 311 - -
Prci13g2034 998 ProSiteProfiles Protein kinase domain profile. 683 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2034 998 Pfam Leucine rich repeat N-terminal domain 16 55 IPR013210 -
Prci13g2034 998 SUPERFAMILY Protein kinase-like (PK-like) 658 985 IPR011009 -
Prci13g2034 998 Gene3D Ribonuclease Inhibitor 296 628 IPR032675 -
Prci13g2034 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Prci13g2034 998 SUPERFAMILY L domain-like 354 609 - -
Prci13g2034 998 FunFam LRR receptor-like serine/threonine-protein kinase EFR 317 625 - -
Prci13g2034 998 Gene3D Ribonuclease Inhibitor 14 295 IPR032675 -
Prci13g2034 998 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 17 124 - -
Prci13g2034 998 SMART serkin_6 683 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2034 998 FunFam LRR receptor-like serine/threonine-protein kinase EFR 654 764 - -
Prci13g2034 998 Pfam Protein kinase domain 684 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g2034 998 SMART LRR_typ_2 251 275 IPR003591 -
Prci13g2034 998 SMART LRR_typ_2 498 522 IPR003591 -
Prci13g2034 998 SMART LRR_typ_2 449 473 IPR003591 -
Prci13g2034 998 SMART LRR_typ_2 153 176 IPR003591 -
Prci13g2034 998 SMART LRR_typ_2 82 106 IPR003591 -
Prci13g2034 998 SMART LRR_typ_2 225 250 IPR003591 -
Prci13g2034 998 SMART LRR_typ_2 201 224 IPR003591 -
Prci13g2034 998 SMART LRR_typ_2 546 574 IPR003591 -
Prci13g2034 998 Gene3D Phosphorylase Kinase; domain 1 646 764 - -
Prci13g2034 998 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 213 984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2034 Prci-Chr13 35348550 35351976 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2034 14 997 Receptor kinase-like Gene Family AT3G47570 44.112 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci13g2034 Pkinase 2.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2034 - - qsa:O6P43_025027 1105.12