Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2032 ATGGGACATATCTTTCCAGACATTGTGGACTGTGCTTCAAGCGTACCCATGGATCACAGAAGCATCCAAAGCAGCAGGACCTGGAATCACGACGTGTTTCCCAGCTTCGTCGATGATCGCACCTCACACTTCGTTAAGGAGCTTATTGCTGCTTTAGGAAGAGAAGATATCCACACTCTCAGAGCAGACAAAACGCTTAAGAACCGAAAGTCCGTTCCGTCAGACATCTTCAAAGCAATTGAAGAGTCGCGAACTTGTATCGTGTTCTTCACATACAGGTATGCTGCCTCAGTGTGGTGCTTGGAGGAACTGGCAAAGATCGCTGACGGCATTAATCAACACATAGTTCTACCAGTCTTCTACCTTGTTCGTCCATTTGAGGTACAGGATCAGAGAAAGCATTACGAACGCGCCTTTACTGAACATGAAGAAAAAGTCAGATTCAATTTAGCCAAGGTACAAAGATGGAGGCTAGCTCTCAAAAGAGTGGGCTCTATTCGGGGCTGGCTTTCAGAAGTTATTGATGATATTGTTAAATCTGCTACGAGGGCATTAAGTCGTAAGAAGAGTTCTAGCTTAGTTGGGATGGGCACTCGTATAAACGCATTAGAAAAGCATCTGAGTATAGGATTCTATGACGATGATGTCCGATTCGTAGGGATTTGTGGGATGTGTGGGATAGGAAAAACGTTTCTTGCTAAAACTATGTATGAAAAGATCTCCGGCCAATTTGATGCTTCTTGTTTTCTTTTCAATGTGAGGAAAGTTGCTATCAATCCGTATGGTCTAAATCATCCACAAGAACAGCTTATTTATGAAACTCCGATGGAAGATGGTTCAAAGATGCGAGATGTTGCCCAGGGATGCACATTTATAAGGGAGAACCTAAAACGTTGGAAGACCCTCTTAGTTCTTGATAATGTTGATCAAATTGAACAATTAGAGGCTCTGGCTGGAAGTTGTGACTGGTTTGATCAAGGGAGTAGAATTATTATAACCACTAGAAATGAGCATATTCTTAGAGTGCATGGTGTGAATGAAGTTTATAGAGTTGAACTATTGAACGGTAAAGAAGCTCTTCAACTTTTTTGTAGCACTGTTTTCAAATGTAATGATCCCATACAAGGTTATGAGGAACAAGGCCAATATGGTTTAAATTATGCTAATGCCTTCCATTAG 1179 0.4156 MGHIFPDIVDCASSVPMDHRSIQSSRTWNHDVFPSFVDDRTSHFVKELIAALGREDIHTLRADKTLKNRKSVPSDIFKAIEESRTCIVFFTYRYAASVWCLEELAKIADGINQHIVLPVFYLVRPFEVQDQRKHYERAFTEHEEKVRFNLAKVQRWRLALKRVGSIRGWLSEVIDDIVKSATRALSRKKSSSLVGMGTRINALEKHLSIGFYDDDVRFVGICGMCGIGKTFLAKTMYEKISGQFDASCFLFNVRKVAINPYGLNHPQEQLIYETPMEDGSKMRDVAQGCTFIRENLKRWKTLLVLDNVDQIEQLEALAGSCDWFDQGSRIIITTRNEHILRVHGVNEVYRVELLNGKEALQLFCSTVFKCNDPIQGYEEQGQYGLNYANAFH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2032 392 Gene3D - 22 182 IPR035897 -
Prci13g2032 392 ProSiteProfiles TIR domain profile. 28 185 IPR000157 GO:0007165
Prci13g2032 392 PRINTS Disease resistance protein signature 218 233 - -
Prci13g2032 392 PRINTS Disease resistance protein signature 295 309 - -
Prci13g2032 392 SMART till_3 29 166 IPR000157 GO:0007165
Prci13g2032 392 Pfam TIR domain 30 181 IPR000157 GO:0007165
Prci13g2032 392 Pfam NB-ARC domain 200 372 IPR002182 GO:0043531
Prci13g2032 392 SUPERFAMILY Toll/Interleukin receptor TIR domain 24 169 IPR035897 -
Prci13g2032 392 Gene3D - 183 349 IPR027417 -
Prci13g2032 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 382 IPR027417 -
Prci13g2032 392 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 382 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2032 Prci-Chr13 35331758 35333060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2032 79 363 WRKY Transcription Factor Family AT4G12020 28.475 1.88e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2032 - - pcin:129290055 800.045