Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2018 ATGGTAGCACCAGAACCTTCAGGGGCCTTACCCCTATTAGGCCATCTTCATCTTCTTGGAGCTCAAGTTCCTCTCGCCCACACCTTAGCTTCTTTCGCAGACAAGTACGGTCCCATCTTCACCATCCGACTCGGGGCCTTCCCTGCCCTCGTTGTTAGCAGCCAAGACGCCATTAAAGACTGCTTCACCACCAACGACAAAACCCTAGCTGCTCGTCCGAAATCAAGCCATGGCGTCCATCTCGGATACAACTACGCCGGGTTCGGGTCTGCGCCGGACGGCCCGTACTGGCGCAAATTGAAGAAGCTGGTCATGCTTGAGCTCTTATCAGCCCGCAGACTAGGAGAGTTGAGGCACGTGTATGAGTGTGAGATCGAAGTATTTATCGGCCATCTTTACTCGTATCTCGGAGATGTTCATGAAGGTAGAGTTGTGATGAACCAGTGGTTGGAGCGATTGACTCTGAATATAATAACGAGGATGATTGCCGGGAAGAGATACTTTGGGGATTTGCAGGATGTGGATAATGAAGGGGCACGTAGGGTTGTGAAACTGTTAAAGGACTGCTTGCATATTTCTGGTGAGTTTGTTCCTTCGGATTTGATTCCATTTCTGGGATGGTTTGGTGGTGAAGGGAAAGTTCTGAGATCGATGAAGAGGATTGCGAATGATTTGGATTCTCTTCTGTCAAGTTGGGTTGAGAATCGTGAGAATCCTAAAGAGTCCACAGAGAAGCAGGATTTCATTGACTTCATGCTCTCTGTAATTGAAGACGACGACCCTACCTCCGGCTATACGCGCGACACTATCATCAAAGCAAATCTCTTGAATCTGATCTTAGCAGGAGCGGACTCAACCTCCCTCGGCATGATATGGACCCTAGCCTTATTATTGAACAACAAACACGTTCTAAAGCGTGCCCAAGAGGAGATCGATCATCACGTAGGCAAGCAAAGATGGGTCCAAACTTCAGATATCAAAAACCTAATTTACCTTCAAGCCATTCTCAAAGAAGCCTTAAGATTATACCCACCAGGTCCTCTTTTAATACCCCATGAAGCAACACAAGACTGTTATATCTCTGGCTATTACGTCCCAAAAGGCACCAGAGTTTTTGCCAACGTGTGGAAACTCCATAGAGACCCATCCATTTGGTCACAGCCTGAGAAGTTCATGCCTGAGAGGTTTATTACAGAAAATAATGGAGATGTTGATCATGAAGGTCGCCATTTTCAGTACCTCCCTTTTGGGTCCGGAAGAAGGGCATGTCCTGGTTCTAGTTTTGCCATGCAAGTGAGTTTGCTGAGTCTGGCTCGTTTGCTTCAAGGGTTTGAGTTGAAGGCCGTAGGCGATGAACCAGTGGACATGAAAGAAGGCTCCAGCTTTACTTTGCCTAAGGAGACTCCATTGGAAGTTCTCCTCACTCCACGACTTTTGTCTCATCAATATCACTCATTATTGTCCTCAAATTCTTAA 1476 0.4695 MVAPEPSGALPLLGHLHLLGAQVPLAHTLASFADKYGPIFTIRLGAFPALVVSSQDAIKDCFTTNDKTLAARPKSSHGVHLGYNYAGFGSAPDGPYWRKLKKLVMLELLSARRLGELRHVYECEIEVFIGHLYSYLGDVHEGRVVMNQWLERLTLNIITRMIAGKRYFGDLQDVDNEGARRVVKLLKDCLHISGEFVPSDLIPFLGWFGGEGKVLRSMKRIANDLDSLLSSWVESXRENPKESTEKQDFIDFMLSVIEDDDPTSGYTRDTIIKANLLNLILAGADSTSLGMIWTLALLLNNKHVLKRAQEEIDHHVGKQRWVQTSDIKNLIYLQAILKEALRLYPPGPLLIPHEATQDCYISGYYVPKGTRVFANVWKLHRDPSIWSQPEKFMPERFITENNGDVDHEGRHFQYLPFGSGRRACPGSSFAMQVSLLSLARLLQGFELKAVGDEPVDMKEGSSFTLPKETPLEVLLTPRLLSHQYHSLLSSNS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2018 492 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PANTHER CYTOCHROME P450 82C3-RELATED 3 484 - -
Prci13g2018 492 Gene3D Cytochrome P450 2 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Prci13g2018 492 FunFam Cytochrome P450 82C4 1 476 - -
Prci13g2018 492 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PRINTS E-class P450 group I signature 57 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PRINTS E-class P450 group I signature 33 52 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 PRINTS E-class P450 group I signature 153 171 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 Pfam Cytochrome P450 4 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g2018 492 SUPERFAMILY Cytochrome P450 4 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2018 Prci-Chr13 35151122 35154213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2018 3 479 Cytochrome P450 AT4G31940 48.975 7.67e-163 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2018 - - gmx:100790675 634.409