Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2002 ATGGCAGAAGCTACTGTTGAGATTGTATCCAAAATCACCATAAAACCATTATCTCCAACACCAAATCACCTCAAACACTTCAAATTTTCTCTGCTCGATGAGATAGCGCCTCCTTCTTCTGTTTACATTCCAATTGTTCTCTTCTACTCTGCTGATAATGATGATGATTTTCCCAAAATGTCACAAAAGTTGAAGACTTCTTTACCAGAAGTTCTCACTCTCTACTATCCATTCTCTGGAAGAATCAAAGGAAACAAAGGAAATCTCTATGTTGATTGCAATGATGAAGGAGTCCTTTACCTTGAAGCAAGACTTCCCTCAAAGCTCTCTGATTTTCTCAAGTGTAATACCAACCAACAACTCAAAGAGATAAAAGGGCTTCTTCCATTAGATCCCTATACACCTAAACAAGACGATGATGAAGAAGATCGCCAAGTAATGGCTGTTCAGGTAAGTGGATTTGGTTGTGGAGGTATAGCTATTGGTGTGTGCATCTCACACAAGCTTTGTGACGGAACAACAGTAGCTTCATTCCTCCAAGCTTGGTCTCAAAAGGCAATGGCAGATCATGCAAGTGAAGTGGCTGATTCTTCTTTGCCTCTTAATATGGAAGCTTCTGTTCTTTTTCCATCCAAAGGCATAGAGATTGACATCAACGACATGATAGGTGAGAAGAGTATTACAACGAAGAGATTCATGTTTAGTGAGGATAGCTTGTGTAGGCTAAAAGAAGAAATTTCAAGAGGATTCAGCTTTAAGCCCACTAGGGTTGAAGCTGTGACAACTTTGATATGGAAATCCGCTATAGAAGCTGCAAGAACCACAGAGACAACTCACCAAAGTAGTTCATTCATGTTACATGCTGTGAACATACGGGGCCGGATGCTATCGCCATTGCCGGAGAATTCTTTAGGTAATCTCTTTGTACCTGCCATTTCTCCATTGCTTGAGGTTGACAAAGAAATGAAGGTGGATTTACAAGATTTGGCAGAAGTAGTGAGGAAAACCATAAAAAGGGTTGATGGCGATTATGTGAGTAAGTTTCAAGGAGAAGGTGAAGAACTTATTGAAATGCTTGAATCAATATTACAAGTGTTGTTTCTGGTGACAGAGAAAGGTGTTCCTTGTTATACCTTCAGTAGCTGGGTGAGGCTTGGCTTCTATGAAACAAACTTCGGATGGGGAAAGCCAACATGGGTTTGTACTATTGGAGTGCCCATAAGAAATGTGATCTTTTTGATGCCAACAAGTTCTGGGGATGGATCAGGAATAGAGGCTTGGGTCACCTTGAATGAGGACCATATGCTCCAATTTCAAAATAATCCTCTACTCCTTCAATTTGCTTCTTTCGATCCTTAA 1359 0.404 MAEATVEIVSKITIKPLSPTPNHLKHFKFSLLDEIAPPSSVYIPIVLFYSADNDDDFPKMSQKLKTSLPEVLTLYYPFSGRIKGNKGNLYVDCNDEGVLYLEARLPSKLSDFLKCNTNQQLKEIKGLLPLDPYTPKQDDDEEDRQVMAVQVSGFGCGGIAIGVCISHKLCDGTTVASFLQAWSQKAMADHASEVADSSLPLNMEASVLFPSKGIEIDINDMIGEKSITTKRFMFSEDSLCRLKEEISRGFSFKPTRVEAVTTLIWKSAIEAARTTETTHQSSSFMLHAVNIRGRMLSPLPENSLGNLFVPAISPLLEVDKEMKVDLQDLAEVVRKTIKRVDGDYVSKFQGEGEELIEMLESILQVLFLVTEKGVPCYTFSSWVRLGFYETNFGWGKPTWVCTIGVPIRNVIFLMPTSSGDGSGIEAWVTLNEDHMLQFQNNPLLLQFASFDP 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2002 452 PANTHER F21J9.9 7 449 - -
Prci13g2002 452 Pfam Transferase family 5 442 - -
Prci13g2002 452 Gene3D - 224 445 IPR023213 -
Prci13g2002 452 Gene3D - 3 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2002 Prci-Chr13 34889822 34891642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2002 6 439 Monolignol Biosynthesis Gene Families AT5G48930 24.176 1.90e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2002 - K13065 gmx:100792323 436.417