Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2001 ATGGCGGAAGCTAAGGTTGAGATTGTATCCAAAATCACCATAAAGCCATTTTCTCCAACACCAAATCACCTCAAACACTTCAAATTTTCTCTTCTTGATGAGTTAGCCCCTCCTCCTTCTGTTTACATTCCAATGGTTCTGTTCTACTCTGCTGATGATGATCATGATTTTCCCAAAATGTCACAAAAGTTGAAGACTTCTTTACCAGAAGTTCTCACTCTCTACTATCCATTCTCTGGAAGAATCAAAGGAAACAAAGGAAATCTCTATGTTGATTGCAATGACGAAGGTGTACTTTACCTTGAAGCAAGACTTCCCTCAAAGCTCTCAGATTTTCTCGAGTATAATACGAACCAACAACTCAAAGAGGTAAAAGGGTTTCTTCCATTAGATCCCTATACACCTAAACATGACGATGATGAAGAAGATCGCCGCGTAATGGCTGTTCAGGTCAGTGAATTTGGTTGTGGAGGTATAGCTATTGGTGTTTGCATCTCACACAAGCTTTGTGACGGAACAACAGTAGCTTCATTCCTCCAAGCTTGGTCTCAAAAGGCAATGACAGATCATGCAAGTGACGTGGCTTCTTCTTCTTTGCCTCTTAATATGGAAGCTTCTGTTCTTTTTCCATCCAAAGGCATAGAGATTGACATCAATGCCATGATAGGTGAGAAGAGTATTACAACGAAGAGATTCTTGTTCAGTGAGGATAGCTTGTGTAGGCTAAAGGAAGAAATTTCAAGAGGATTTAGCTTTAAGCCCACTAGGGTTGAAGCTGTGACAACTTTGATTTGGAAATCCGCTTTAGAAGCTGCAAGAACCACAGAGACAACTCACCAAAATAGTTCATTCATCTTACATGCTGTGAACATACGTGGCCGAATGCTGTCGCCATTGCCGGAGAATTCTTTAGGTAATCTCTTTGTACCTGCCATTTCCCCATTGCTTGAGGTTGACAAAGAAATGAAGGTGGGGCTACAAGATTTGGCAGAAGAAGTGAGGAAAACCATCAAAATGGTTGATGGGAATTATGTGAGTAAGTTTCAATGA 1050 0.4076 MAEAKVEIVSKITIKPFSPTPNHLKHFKFSLLDELAPPPSVYIPMVLFYSADDDHDFPKMSQKLKTSLPEVLTLYYPFSGRIKGNKGNLYVDCNDEGVLYLEARLPSKLSDFLEYNTNQQLKEVKGFLPLDPYTPKHDDDEEDRRVMAVQVSEFGCGGIAIGVCISHKLCDGTTVASFLQAWSQKAMTDHASDVASSSLPLNMEASVLFPSKGIEIDINAMIGEKSITTKRFLFSEDSLCRLKEEISRGFSFKPTRVEAVTTLIWKSALEAARTTETTHQNSSFILHAVNIRGRMLSPLPENSLGNLFVPAISPLLEVDKEMKVGLQDLAEEVRKTIKMVDGNYVSKFQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2001 349 Gene3D - 224 349 IPR023213 -
Prci13g2001 349 PANTHER F21J9.9 7 349 - -
Prci13g2001 349 Pfam Transferase family 4 346 - -
Prci13g2001 349 Gene3D - 3 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2001 Prci-Chr13 34858015 34859810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2001 5 345 Monolignol Biosynthesis Gene Families AT5G48930 24.451 5.77e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2001 - K13065 gmx:100792323 322.398