Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1961 ATGAGAGAAACCATAATGGATCTTCTTTCTCTCCCAACAATAACAGCAATTTCAATCCTTCTTTTGTCACTACTTGTATGGATCATCAGAGCTCAGAAAAACTCACCAAACCACACAACCAAAGGCATGGTAGCACCAGAACCTTCAGGAGCCTTACCCCTTTTGGGTCATCTTCATCTTCTTGGAGCTCAAGCTCCTCTTGCTCACACCTTAGCTTCCTTCGCAGACAAGTACGGCCCCATCTTCACCATCAGACTCGGAGCCTTCCCTGCCCTCGTTGTTAGCAGCCAAGACGCCATTAAAGACTGCTTCACCACCAACGACAAAACCCTAGCCTGTCGCCCGAGATCCAGCCACGGCGTCTACCTCGGTTACAACTTCGCCGGGTTCGGGTTCGCGCCCGACGGCCCGTACTGGCGCAAATTGAGGAAGCTCGTCATGCTCGAGCTACTATCGGCTCGGCGACTGGAATCGTTGAGGCAAGTGTATGAATCTGAGATCGATGTTTTCATCGGCGATCTGTACTCGTACATCGTCGGAGATGGTAATAATAAAGGTAGGATTGTGATTAGCGAGTGGTTGGAGCGATTGACGCTGAACGTAATCACGAAGATGATTGCAGGGAAGAGGTATTTTGGGAATTTGCAAGATGTGGATGATGAAGAGGCACGTAGGGTTGTGAAGCTGATAAAGGATTTCATGCATATTTCTGGAGAATTTGTTCCTTCAGATTTGATTCCGTTTCTGGGATGGTTTCGTGGTGAAGGAAAGGTACTGAGATCGATGAAGAGGATTGCGAATGATCTGGATTCTCTGGCGTCAAGTTGGGTTGAAGAGCATCGTGTGAAGAAGAAAGAGTTCAGTGAGAAGCAGGATTTTATTGACTTCATGCTTTCTGTAATTGAAGAAGACGACTCTGCCTTGGGCCATACACGCGACACCATCATCAAGGCAAATGTCTTGAGTTTGATCTTAGCTGGGGCAGACACAACCTCCATCAACTTGACATGGATGCTAGCCTTACTATTGAACAACAAACACGTCCTAAAGCGTGCCCAAGAGGAGGTCGATCATCACGTGGGCAAACAAAGATGGGTCCAAACTTTAGATATCAAAAACCTAATTTACCTTCAAGCTATTGTCAAAGAAACCCTAAGATTATACCCACCAGGTCCTCTCTTGGTCCCCCATGAAGCAACACAAGACTGTTGTATCTGTGGCTATTACGTCCCAAAAGGCACCAGAGTATTAGCTAATGTGTGGAAGCTCCACAGAGACCCAACCATTTGGTCACAGCCTGAAAAGTTCATGCCTGAGAGGTTCATCACAGAGAATGGAGATATTGACAATGAAGGTCACCATTTTCAGTACCTTCCTTTTGGGATTGGAAGAAGGGCTTGTCCTGGTTCGAATTTAGCAGTGCAAGTAAGTGTGTTGAGTCTAGCTCGTTTGCTTCAAGGGTTTGAGTTGGTGAACGTAGGTGGTGAACCAGTGGACATGAAAGAAGGCACAAGCATTACTTTGCCCAAGGCAACTCCATTGGAAGCTGTTCTAACCCCACGATGTTTACCTCATCAATATCAATTATTGTCGAAAACATCTTAA 1605 0.4629 MRETIMDLLSLPTITAISILLLSLLVWIIRAQKNSPNHTTKGMVAPEPSGALPLLGHLHLLGAQAPLAHTLASFADKYGPIFTIRLGAFPALVVSSQDAIKDCFTTNDKTLACRPRSSHGVYLGYNFAGFGFAPDGPYWRKLRKLVMLELLSARRLESLRQVYESEIDVFIGDLYSYIVGDGNNKGRIVISEWLERLTLNVITKMIAGKRYFGNLQDVDDEEARRVVKLIKDFMHISGEFVPSDLIPFLGWFRGEGKVLRSMKRIANDLDSLASSWVEEHRVKKKEFSEKQDFIDFMLSVIEEDDSALGHTRDTIIKANVLSLILAGADTTSINLTWMLALLLNNKHVLKRAQEEVDHHVGKQRWVQTLDIKNLIYLQAIVKETLRLYPPGPLLVPHEATQDCCICGYYVPKGTRVLANVWKLHRDPTIWSQPEKFMPERFITENGDIDNEGHHFQYLPFGIGRRACPGSNLAVQVSVLSLARLLQGFELVNVGGEPVDMKEGTSITLPKATPLEAVLTPRCLPHQYQLLSKTS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1961 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Prci13g1961 534 Pfam Cytochrome P450 46 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 PANTHER CYTOCHROME P450 82C3-RELATED 21 525 - -
Prci13g1961 534 CDD CYP82 79 521 - -
Prci13g1961 534 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 FunFam Cytochrome P450 82C4 35 519 - -
Prci13g1961 534 Gene3D Cytochrome P450 37 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1961 534 SUPERFAMILY Cytochrome P450 46 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1961 Prci-Chr13 34691037 34704142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1961 45 521 Cytochrome P450 AT4G31940 49.897 6.27e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1961 - - gmx:100790675 652.129