Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1960 ATGAGAGAAACCATAATGGATCTTCTTTCTCTCCCAACAATAACAGCAATTTCAATCCTTCTTTTGTCACTACTTGTATGGATCATCAGAGCTCAGAAAAACTCACCAAACCACACAACCAAAGGCATGGTAGCACCAGAACCTTCAGGAGCCTTACCCCTTTTGGGTCATCTTCATCTTCTTGGAGCTCAAGCTCCTCTTGCTCACACCTTAGCTTCCTTCGCAGACAAGTACGGCCCCATCTTCACCATCAGACTCGGAGCCTTCCCTGCCCTCGTTGTTAGCAGCCAAGACGCCATTAAAGACTGCTTCACCACCAACGACAAAACCCTAGCCTGTCGCCCGAGATCCAGCCACGGCGTCTACCTCGGTTACAACTTCGCCGGGTTCGGGTTCGCGCCCGACGGCCCGTACTGGCGCAAATTGAGGAAGCTCGTCATGCTCGAGCTACTATCGGCTCGGCGACTGGAATCGTTGAGGCAAGTGTATGAATCTGAGATCGATGTTTTCATCGGCGATCTGTACTCGTACATCGTCGGAGATGGTAATAATAAAGGGAAGAGGTATTTTGGGAATTTGCAAGATGTGGATGATGAAGAGGCACGTAGGGTTGTGAAGCTGATAAAGGATTTCATGCATATTTCTGGAGAATTTGTTCCTTCAGATTTGATTCCGTTTCTGGGATGGTTTCGTGGTGAAGGAAAGGTACTGAGATCGATGAAGAGGATTGCGAATGATCTGGATTCTCTGGCGTCAAGTTGGGTTGAAGAGCATCGTGTGAAGAAGAAAGAGTTCAGTGAGAAGCAGGATTTTATTGACTTCATGCTTTCTGTAATTGAAGAAGACGACTCTGCCTTGGGCCATACACGCGACACCATCATCAAGGCAAATGTCTTGAGTTTGATCTTAGCTGGGGCAGACACAACCTCCATCAACTTGACATGGATGCTAGCCTTACTATTGAACAACAAACACGTCCTAAAGCGTGCCCAAGAGGAGGTCGATCATCACGTGGGCAAACAAAGATGGGTCCAAACTTTAGATATCAAAAACCTAATTTACCTTCAAGCTATTGTCAAAGAAACCCTAAGATTATACCCACCAGGTCCTCTCTTGGTCCCCCATGAAGCAACACAAGACTGTTGTATCTGTGGCTATTACGTCCCAAAAGGCACCAGAGTATTAGCTAATGTGTGGAAGCTCCACAGAGACCCAACCATTTGGTCACAGCCTGAAAAGTTCATGCCTGAGAGGTTCATCACAGAGAATGGAGATATTGACAATGAAGGTCACCATTTTCAGTACCTTCCTTTTGGGATTGGAAGAAGGGCTTGTCCTGGTTCGAATTTAGCAGTGCAAGTAAGTGTGTTGAGTCTAGCTCGTTTGCTTCAAGGGTTTGAGTTGGTGAACGTAGGTGGTGAACCAGTGGACATGAAAGAAGGCACAAGCATTACTTTGCCCAAGGCAACTCCATTGGAAGCTGTTCTAACCCCACGATGTTTACCTCATCAATATCAATTATTGTCGAAAACATCTTAA 1539 0.4626 MRETIMDLLSLPTITAISILLLSLLVWIIRAQKNSPNHTTKGMVAPEPSGALPLLGHLHLLGAQAPLAHTLASFADKYGPIFTIRLGAFPALVVSSQDAIKDCFTTNDKTLACRPRSSHGVYLGYNFAGFGFAPDGPYWRKLRKLVMLELLSARRLESLRQVYESEIDVFIGDLYSYIVGDGNNKGKRYFGNLQDVDDEEARRVVKLIKDFMHISGEFVPSDLIPFLGWFRGEGKVLRSMKRIANDLDSLASSWVEEHRVKKKEFSEKQDFIDFMLSVIEEDDSALGHTRDTIIKANVLSLILAGADTTSINLTWMLALLLNNKHVLKRAQEEVDHHVGKQRWVQTLDIKNLIYLQAIVKETLRLYPPGPLLVPHEATQDCCICGYYVPKGTRVLANVWKLHRDPTIWSQPEKFMPERFITENGDIDNEGHHFQYLPFGIGRRACPGSNLAVQVSVLSLARLLQGFELVNVGGEPVDMKEGTSITLPKATPLEAVLTPRCLPHQYQLLSKTS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1960 512 SUPERFAMILY Cytochrome P450 46 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Prci13g1960 512 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 Gene3D Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 PANTHER CYTOCHROME P450 82C3-RELATED 21 503 - -
Prci13g1960 512 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 Pfam Cytochrome P450 46 172 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 Pfam Cytochrome P450 190 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci13g1960 512 FunFam Cytochrome P450 82C4 184 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1960 Prci-Chr13 34691036 34704143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1960 45 499 Cytochrome P450 AT4G31940 47.844 2.05e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1960 - - gmx:100790675 612.838