Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1933 ATGGATGAGGATTTTGATATGCCGCCGCCGGAGGAGATGAACGAGGACTTTGATCTCCCCGACGACGGTACCGGCCTTAAGGTTGGAGAGGAGAAGGAGATCGGCCAGCAGGGGTTGAAGAAGAAGCTCCTCAAGGATGGTGAAGGCTGGGAGACACCTGAAGTGGGCGATGAAGTTGAAGTTCACTACACGGGAACGCTGCTTGATGGGACTAAGTTTGATTCGAGCCGCGACAGGGGAACGCCCTTCAAGTTTACGCTCGGGCAAGGGCAAGTAATTAAAGGGTGGGATCAGGGTATTAAAACCATGAAGAAAGGTGAAAATGCCATTTTCACCATCCCTCCTGAACTAGCATATGGCGAATCCGGTTCACCTCCAACGATTCCTCCTAATGCTACTCTGCAATTTGATGTTGAGCTTCTGTCTTGGACGAGTGTGAAGGATATATGTAAGGATGGCGGCATATTTAAGAAAATACTTACTGAAGGAGAGAAATGGGAGAACCCCAAAGATCCTGATGAAGTTTTAGTTAAATATGAAGCTCGTCTTGAAGATGGAACGCTTGTATCAAAATCTGATGGAGTGGAGTTTACAGTGAAAGATGGTTACTTCTGTCCTGCGTTGTCAAAGGCTGTGAAAACCATGAAAAAGGGAGAGAAAGTGCTTTTAACTGTGAAGCCGCAGTATGGTTTTGGTGAGAAGGGTAAGGCAGCACATGGTGATGAAGGTGCAGTTCCACCTAATGCAACCTTGCAGATAACTCTTGAATTGGTATCTTGGAAGACTGTTTCAGAAGTAACTAATGATAAGAAGGTCATTAAGAAAATCCTCAGTGAAGGGGAAGGATATGAGCGTCCAAATGAGGGAGCTGTTGTGAAATTGAAATTGATTGGTAAACTGCAAGATGGTACTGTGTTCTTTAAGAAGGGTCATGATGAAGAGCTGTTTGAATTCAAAACAGATGAAGAGCAAGTTATCGATGGGCTTGATAGAGCAGTGTTGACTATGAAAAAGGGTGAAGTAGCATTGTTGACTGTTGCACCTGAGTATGCCTTTGGATCATCAGAGGCTAAGCAAGAATTGGCTGTTGTTCCTCCCAACTCAACTGTTTACTATGAAGTTGAACTAGTATCATTTGTGAAGGAGAAGGAGTCCTGGGATATGAACACTCAGGAGAAGGTTGAGGGTGCGGGTAAGAAGAAAGAAGAAGGAAATGCGTTGTTTAAGAGTGGAAAATATGCAAAAGCTTCTAAAAGATATGAGAAGGCTGTAAAGTACGTAGAGTATGATTCCGCCTTCAGTGAAGAGGAAAAGAAGCAGGCCAAGGCACTAAAGGTCGCATGCAATCTGAACAATGCGGCTTGCAAGTTGAAATTGAAAGATTACAAAGAAGCCGAGAGATTGTGTACTAAGGTTCTGGACCTTGAAAGTAGAAACGTGAAGGCACTTTATAGAAGAGCCCAGGCCTACATCGAGCTGGCTGACTTGGATTTGGCTGAATTTGATATAAAGAAAGCTCTGGAGATTGACCCTGATAACAGGGATGTGAAGCTGGAGTACAAGACCTTGAAGGAAAGGATGAAGGAGTACAACAGAAAGGAAGCTAAATTTTATGGAAATATGTTTGCCAAGATGACTAAGGTGGAGTCAGATGGCAGTAATAAGCCAGCAGACAAAGATGCTGAACCTATGAGCATCGACAGCAAAGCATAA 1713 0.439 MDEDFDMPPPEEMNEDFDLPDDGTGLKVGEEKEIGQQGLKKKLLKDGEGWETPEVGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGQVIKGWDQGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKKILTEGEKWENPKDPDEVLVKYEARLEDGTLVSKSDGVEFTVKDGYFCPALSKAVKTMKKGEKVLLTVKPQYGFGEKGKAAHGDEGAVPPNATLQITLELVSWKTVSEVTNDKKVIKKILSEGEGYERPNEGAVVKLKLIGKLQDGTVFFKKGHDEELFEFKTDEEQVIDGLDRAVLTMKKGEVALLTVAPEYAFGSSEAKQELAVVPPNSTVYYEVELVSFVKEKESWDMNTQEKVEGAGKKKEEGNALFKSGKYAKASKRYEKAVKYVEYDSAFSEEEKKQAKALKVACNLNNAACKLKLKDYKEAERLCTKVLDLESRNVKALYRRAQAYIELADLDLAEFDIKKALEIDPDNRDVKLEYKTLKERMKEYNRKEAKFYGNMFAKMTKVESDGSNKPADKDAEPMSIDSKA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1933 570 FunFam Peptidylprolyl isomerase 29 147 - -
Prci13g1933 570 SUPERFAMILY FKBP-like 148 264 - -
Prci13g1933 570 FunFam Peptidylprolyl isomerase 262 382 - -
Prci13g1933 570 SMART tpr_5 397 430 IPR019734 GO:0005515
Prci13g1933 570 SMART tpr_5 480 513 IPR019734 GO:0005515
Prci13g1933 570 SMART tpr_5 446 479 IPR019734 GO:0005515
Prci13g1933 570 SUPERFAMILY TPR-like 385 545 IPR011990 GO:0005515
Prci13g1933 570 MobiDBLite consensus disorder prediction 548 570 - -
Prci13g1933 570 MobiDBLite consensus disorder prediction 1 19 - -
Prci13g1933 570 Gene3D - 31 147 IPR046357 GO:0003755
Prci13g1933 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755
Prci13g1933 570 Pfam Tetratricopeptide repeat 480 513 IPR001440 GO:0005515
Prci13g1933 570 Gene3D Tetratricopeptide repeat domain 383 540 IPR011990 GO:0005515
Prci13g1933 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 51 141 IPR001179 GO:0003755
Prci13g1933 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 167 258 IPR001179 GO:0003755
Prci13g1933 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 377 IPR001179 GO:0003755
Prci13g1933 570 FunFam Peptidylprolyl isomerase 148 261 - -
Prci13g1933 570 Gene3D - 148 261 IPR046357 GO:0003755
Prci13g1933 570 MobiDBLite consensus disorder prediction 1 27 - -
Prci13g1933 570 PANTHER PEPTIDYLPROLYL ISOMERASE 31 146 - -
Prci13g1933 570 MobiDBLite consensus disorder prediction 551 570 - -
Prci13g1933 570 ProSiteProfiles TPR repeat profile. 480 513 IPR019734 GO:0005515
Prci13g1933 570 FunFam Peptidylprolyl isomerase 385 540 - -
Prci13g1933 570 SUPERFAMILY FKBP-like 34 153 - -
Prci13g1933 570 Gene3D - 262 382 IPR046357 GO:0003755
Prci13g1933 570 Coils Coil 513 533 - -
Prci13g1933 570 SUPERFAMILY FKBP-like 266 398 - -
Prci13g1933 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 380 IPR001179 GO:0003755
Prci13g1933 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1933 Prci-Chr13 34329754 34334262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1933 1 545 Calmodulin-binding Proteins AT3G25230 81.603 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1933 K09571 - qsa:O6P43_026712 983.4