Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1886 ATGGATACGAATTTAATCCCAAGATTGGGTCTTGAATTTGAAACTTTAGAAGAAGCGTGGCAATATTGGGTGAGTTATGGTGGCAAAACTGGATTTGGTGTTAGAAAGCAATATTTCAGCAAGAGTAGGAAGGATGGCACCATAACTTCATACAGATACGTGTGTTGCAAGGAAGGTGTACGAAGGCCAGATAAAAGAGATTATAAAACAATTCATCCTCGCCCAGAGACAAGAACAGGATGCAAAGCAAGAATGACAGTATCACGCATAAATGGAAAATATAGAATTGTTGACTTCGTTGATGAGCACAATCACCCGCTTCATTTTCCAGAAACAGTGCATTTGAAAGCATCCCAACGGAAAGAGAATGAGGATGAGAAGGATGTAAAGATCCGAGAATTGACTGCTGAGCTACAACGTGAGAGAAAGCGAAGAGCAGTTCTTCAACAACAGCTTGAGATAATTTTGAGAGATGTTGAGGAACATTCCATTAAAGTATCAAAAAGCATTAATGATAGTCTTCAGAGAATGAGAGAGGTTGAAGAGAAAGCGAATAGCACCTCATCCTCCTCGGCAAAGCTAGATGCTACTAAGTAA 597 0.3987 MDTNLIPRLGLEFETLEEAWQYWVSYGGKTGFGVRKQYFSKSRKDGTITSYRYVCCKEGVRRPDKRDYKTIHPRPETRTGCKARMTVSRINGKYRIVDFVDEHNHPLHFPETVHLKASQRKENEDEKDVKIRELTAELQRERKRRAVLQQQLEIILRDVEEHSIKVSKSINDSLQRMREVEEKANSTSSSSAKLDATK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1886 198 Coils Coil 124 158 - -
Prci13g1886 198 MobiDBLite consensus disorder prediction 184 198 - -
Prci13g1886 198 MobiDBLite consensus disorder prediction 177 198 - -
Prci13g1886 198 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 176 - -
Prci13g1886 198 Pfam FAR1 DNA-binding domain 22 108 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1886 Prci-Chr13 33484162 33487927 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci13g1886 FAR1 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1886 - - pcin:129291239 401.364