Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1885 ATGGATTTGGACAAGAGAAATGATGGAGAACAAGGCTATGTAGAAGTTAGTACAAGTATGCTACATGGCATTGAATTTCAAGAACCATATGTAGGCATGGAATTTAATTCTGAAGAAGATGCCAGGAAATACTATGTTGAATATGCTAGACGGGTGGGATTTGTAGTACGTATCATGCAACGGCGCCGTTCAGGGATTGATGGGAGGACTCTTGCCCGTCGACTTGGATGTAACAAACAAGGCTTCTCTCCAAATAGTAAGGGCACAATTGGAGCTGACAAAAAGCCAAGGCCAAGTGCACGAGAAGGTTGCAAGGCAACAATTTTAGTGAAGTTGGAAAAATCTGGAAAATGGGTTGTTACAAGATTTGTAAAGGATCATAACCATCCTCTAATTGTTACAGCAAATGGGTTCATCACACCGGGTGATAAAGACAAGAAAATTGAAGAACTAACTAAGGAATTAGAGCGCCAAGACCAGCTATGTGCAGCATATAGAGAAAAACTGATCCGTTTCATGAATAATGTGGAGGAACAAACACAAGAAATGTCAGAAAAAATTCAAATTATTGTAGAAAATTTAAGGAAAGTTGAATCTGAAGTGCAAAAGAATCCCATGAATAGAAAGTCTTGGGGTTTAACCTGA 645 0.3907 MDLDKRNDGEQGYVEVSTSMLHGIEFQEPYVGMEFNSEEDARKYYVEYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNSKGTIGADKKPRPSAREGCKATILVKLEKSGKWVVTRFVKDHNHPLIVTANGFITPGDKDKKIEELTKELERQDQLCAAYREKLIRFMNNVEEQTQEMSEKIQIIVENLRKVESEVQKNPMNRKSWGLT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1885 214 Coils Coil 148 193 - -
Prci13g1885 214 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 200 - -
Prci13g1885 214 Pfam FAR1 DNA-binding domain 43 132 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1885 Prci-Chr13 33478883 33484092 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci13g1885 FAR1 3.6e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1885 - - vun:114183030 338.576