Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1884 ATGGATTTGGATGCTGAAGTAGAAACTGTTCAGAGTTCTGCGGAGAAAACATCAGCAACATGTGAAGATAGATCAATTTCAGAACCTTGTGTTGGCATGGAGTTTGATTCTGAAGAGGCTGCCAGGGAATTTTACAGTGGATATGCAAGACATGAAGGGTTTGTCGTCCGTCTTGACCGTTGCCATCGTTCTGAGGCTGATAATAGAATCCTTTCTCGTCGTTTTTCATGCAATAAGCAAGGTTTTTATGTGAGACCAAGAAATGGGACAAGACCTGTTCGGAGACCACGAGTTAGTATAAGAGAAGGCTGTGAGGCTATGATGTTAGTTAAAGTAAACAATCATGGGAAATGGGTTGTTACCAAATTTGTGAAGGAACACTGTCATCCTCTACAAGTTTCTGCCTATTCTTCTGATAGAACCTTGGAATCAAAGGATATGAAGATTCAACTACTCACAAGGGAGCTTCAGCGTCATGATAGGCTATGTCAACTATACCGCCAGCTGTTACTTTCCCTACTGGAATCTGTGGAGGAGCAAACTGAAGTTTTATCAGGAAAACTCGAACTTGTCGTTAGCAGTGTAAAACAGCTTCAGAATGATGTTGAAAAACCTTTGGACACTCACTAG 630 0.4159 MDLDAEVETVQSSAEKTSATCEDRSISEPCVGMEFDSEEAAREFYSGYARHEGFVVRLDRCHRSEADNRILSRRFSCNKQGFYVRPRNGTRPVRRPRVSIREGCEAMMLVKVNNHGKWVVTKFVKEHCHPLQVSAYSSDRTLESKDMKIQLLTRELQRHDRLCQLYRQLLLSLLESVEEQTEVLSGKLELVVSSVKQLQNDVEKPLDTH 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1884 209 Pfam FAR1 DNA-binding domain 43 132 IPR004330 -
Prci13g1884 209 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1884 Prci-Chr13 33473983 33477536 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci13g1884 FAR1 7.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1884 - - var:108347130 239.195