Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1868 ATGGTTCTGAGTAGCAGATTTTTCAGAGCTCATTTTGTTATAAGTATCTTGCTGCTGCTTGGTTGTAGCATGACCAATGGGACTGATACTGATATTTTCTGCTTGAAAAGTATACAAGATTCACTTGAAGACCCTTATAATACTTTGAAGACTTCCTGGAATTTCAATAATAAAACAGAAGGATTTATCTGTCACTTTACTGGGGTTGATTGTTGGCACGACGATGAGAACAAAGTCTTAAACCTCAAGCTGTCGAATATGGGACTCAAGGGTCAATTTCCTCATGCCATACAAAATTGCACAAGCTTAACTGGATTAGATCTTTCGATCAACAAACTCTCGGGAACCATTCCAGCTGATATTTATAAACTTCTTAAATTTGTGGTAACCCTGGACCTCTCATCAAATGACTTTTCAGGAGAGATCCCTGTGGGCCTTGCAAATTGTTCCTATCTTAATACCCTTAAACTTGATCAAAATCGACTAACTGGTCAAATTCCCCCACAACTTGCCCAGCTCGAACGGCTTAAGACTTTTACTGTCACAAATAATTTTTTGACGGGGCCAGTTCCATCTTTTGGAAGCAAAATTGCGGCAGATAGTTATTCAAATAATTCAGGACTCTGTGGGGCTCCCTTGGATCCATGTCAGGGTAAGAAGGCTAACACTGCAATTATAGCTGGTGCTGCTGTTGGTGGGGTAACTGTTGCAGCACTAGCATTGGGTATTGTGGCATTCTTCTTTGTCCGCCGAGTCTCTGTGAAGAAGGAGGAGGATCCTGAAGGAAATAAATGGGCAAGAAGCCTAAAGGGAACGAAAGGAATAAAGGTTTCTATGTTTGAAAAGTCAGTTTCAAAAATGAAATTGAGTGATCTCATGAAAGCAACTAACAACTTCAGTAAAAGCAATATCATTGGTTCAGGAAGAACAGGGACTATGTACAAAGCTGTCCTTGATGATGGGGGCACATGGCTCATGGTTAAAAGGTTGCAGGAATCTCAATACTCAGAAAAGGAATTTGCGTCTGAAATGACTACATTGGGGACTGTTAGACATCGTAACTTGGTTTCCCTTTTAGGATTTTGTGTGGCCAAGCAGGAGAGGCTTTTGGTGTATAAATATATGGAAAATGGAAGCCTTCACGATCAGCTACATCCTGCTACTGGTGGAAGTACCATGGAGTGGTCTTTAAGGCTAAAAATTGCTATTGGGGCAGCCAAAGGATTAGCATGGCTTCATCATAGCTGCAATCCTCGCATTATTCACCGAAACATAAGCTCTAAATGCATCTTGTTGGATGCAGATTTTGAGCCGAAAATTTCTGATTTTGGCCTTGCTAGATTGATGAATCCAATCGACACACATTTGAGTACTTTTATAAATGGGGAGTTTGGAGATCTTGGTTATGTTGCTCCTGAATATACAAGAACTCTGGTGGCTACGCCCAAGGGAGATGTCTATAGCTTTGGTACTGTGCTTCTTGAGTTGGTGACAGGTGAGAGGCCTACCCATGTGGCTAAAGCTCCTGAAACATTCAAAGGAAATTTGGTGGAGTGGATTTCACAGCTCTCAAGCAAATCTGAACTCCAGGATGCTATTGATGAATCATTACTTGGGAAGGGTGTTAATGATGAGATTTTCCAATTTCTCAAGGTTGCATGCAACTGCGTTTCACCAATTCCAAAGGAAAGGCCCACTATGTTTGAAGTGTACCAACTTCTTAGAGCAATTGCGAGCAGATACAATTTCACAGCTGATGATGACATTTTGGTACCTACTGATCCTGGCGATGCTGCCAATTTCGAGGAACTTATTGTCGCACGAGAAGAAAAATAG 1836 0.4134 MVLSSRFFRAHFVISILLLLGCSMTNGTDTDIFCLKSIQDSLEDPYNTLKTSWNFNNKTEGFICHFTGVDCWHDDENKVLNLKLSNMGLKGQFPHAIQNCTSLTGLDLSINKLSGTIPADIYKLLKFVVTLDLSSNDFSGEIPVGLANCSYLNTLKLDQNRLTGQIPPQLAQLERLKTFTVTNNFLTGPVPSFGSKIAADSYSNNSGLCGAPLDPCQGKKANTAIIAGAAVGGVTVAALALGIVAFFFVRRVSVKKEEDPEGNKWARSLKGTKGIKVSMFEKSVSKMKLSDLMKATNNFSKSNIIGSGRTGTMYKAVLDDGGTWLMVKRLQESQYSEKEFASEMTTLGTVRHRNLVSLLGFCVAKQERLLVYKYMENGSLHDQLHPATGGSTMEWSLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFINGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGERPTHVAKAPETFKGNLVEWISQLSSKSELQDAIDESLLGKGVNDEIFQFLKVACNCVSPIPKERPTMFEVYQLLRAIASRYNFTADDDILVPTDPGDAANFEELIVAREEK 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1868 611 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 375 593 - -
Prci13g1868 611 Gene3D Ribonuclease Inhibitor 29 218 IPR032675 -
Prci13g1868 611 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 260 374 - -
Prci13g1868 611 Gene3D Phosphorylase Kinase; domain 1 260 374 - -
Prci13g1868 611 FunFam Nuclear pore complex protein NUP107 28 192 - -
Prci13g1868 611 CDD TM_EGFR-like 223 257 - -
Prci13g1868 611 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 48 193 - -
Prci13g1868 611 SUPERFAMILY L domain-like 30 196 - -
Prci13g1868 611 CDD STKc_IRAK 305 574 - -
Prci13g1868 611 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Prci13g1868 611 SUPERFAMILY Protein kinase-like (PK-like) 277 574 IPR011009 -
Prci13g1868 611 ProSiteProfiles Protein kinase domain profile. 299 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1868 611 Gene3D Transferase(Phosphotransferase) domain 1 375 590 - -
Prci13g1868 611 Pfam Protein kinase domain 300 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1868 Prci-Chr13 33268668 33271813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1868 16 588 Receptor kinase-like Gene Family AT3G28450 49.231 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Prci13g1868 Pkinase 4.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1868 - - qsa:O6P43_026768 935.25