Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1856 ATGTTGAAAAAGGAAGATAACCGTATTTATAGTGCTAATTTCAAAATTTCCAGTATTAATGCACCAGATATGGGTGTTCTCTATTCGCCCAATTTTATGTTTTCTTTTCTAAATGCAAAATTTTTAAATACAGATAATTCAAATCTGCTAATGCAGCAAATCCCTACTCTGGTTGTCTCCAGATATTGTCCTATTTTACCGAAAAGAGCAACACTTGTTAGAACTTCTTCGAAGAACAGATCATGGGAGGTTGATATTGAGGAAGAAGATGACAAAAGATTCTATCTCAAAAATGGTTGGAATACATTTGTAGAAGATAATGATTTGGAAACTGCTGAGTTTCTGGTTTTCAAATTCGATGCAGGTATGAGGGAACAATTGTGGAAGCATTCAGTGAAGGCCCCAACTTGGACTGTAATGAGAATCCTTCATTCAAAATTATTCTGCAACAAGCCTATGCCAAAAAAGGTGTCATGTGCTTTCCAACCGACTTCTTCAAGAAGCATATGA 510 0.3549 MLKKEDNRIYSANFKISSINAPDMGVLYSPNFMFSFLNAKFLNTDNSNLLMQQIPTLVVSRYCPILPKRATLVRTSSKNRSWEVDIEEEDDKRFYLKNGWNTFVEDNDLETAEFLVFKFDAGMREQLWKHSVKAPTWTVMRILHSKLFCNKPMPKKVSCAFQPTSSRSI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1856 169 CDD B3_DNA 61 120 IPR003340 GO:0003677
Prci13g1856 169 Pfam B3 DNA binding domain 43 128 IPR003340 GO:0003677
Prci13g1856 169 ProSiteProfiles B3 DNA-binding domain profile. 37 131 IPR003340 GO:0003677
Prci13g1856 169 SMART B3_2 38 133 IPR003340 GO:0003677
Prci13g1856 169 SUPERFAMILY DNA-binding pseudobarrel domain 45 124 IPR015300 -
Prci13g1856 169 PANTHER B3 DOMAIN-CONTAINING 36 121 - -
Prci13g1856 169 Gene3D - 29 134 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1856 Prci-Chr13 32982706 32985282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1856 41 121 REM Transcription Factor Family AT3G06220 36.145 3.86e-07 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci13g1856 B3 4.1e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1856 - - pcin:129290226 246.128