Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1833 ATGAGCTCTAACCTTCAGAAACTCGGACATGATGATAATAAACAAGTAGAACAACGACGCAAAGAAGATGAAGACGCCGACGAGAACGTATTTCTACATCAATGCGAGACAATACCGTTGTCATCACCGCCGCCGTGGAGGTTACCGGAGCCTTCAAGGTCGGCGACCTCCCATGCGGAGGACAACAACGAGGAAGTTGTGCACGCAGAGAAGGTGAAGGTGCATATATTTGACTTGGAGTCCTCTTCTTCTTCTTCTTCCGGCATGGTGGTGCCGCCGTTCTCATGGCGGAAGCTGTGGCTGTTCACGGGCCCGGGGCTGCTGATGAGCGTAGCGTTTTTGGACCCAGGGAATTTGGAGGGAGATTTGCAGGCAGGAGCCATTGGAGGGTACTCATTGTTGTGGCTTTTGATGTGGACGACGATCATGGGGTTGCTGATACAGCTGTTGTCAGCAAGGCTTGGGGTGGCGACCGGGCGGCACTTGGCGGAGCTGTGCCAGGAGGAGTATGGAAGATGGGCGAGGTTGGTGCTGTATGTGATGGCAGAAATGGCTTTGATAGCTGCAGATATTCAGGAGGTTATTGGTAGTGCCATAGCCATCAAAATTCTAAGTCATGGGATTTTACCTATTTGGGCAGGAGTGGTAATCACAGCCTTGGATAGTTTTGTGTTCCTGTTCCTAGAGAACTATGGAGTGAGGAAGCTGGAAGGTGTCTTCGCAATATTCATTGGAACTATGGCCCTTTCCTTTGCTTGGATGTTCCTTGAAACAAAGCCTAGTCCTAAACAACTTCTTATCGGCATTTTGGTCCCAAAAGTGAGCTCAAGAACGCTTCGTCAAGCTGTGGAACTGATAGGCTGTGTGATAACCCCACACAACGTGTTCCTCCACTCAGCCCTGGTCCAATCCAGAAACATCAACATTCACAACAAAGGCCAAGTCCAAGAGGCTCTCAACTACTACACAATCGAGTCCTCACTCGCACTCCTCATCACCTTCTTCATCAACCTCTCAGTCATGACTGTCTTCGCTAGGGTTTTCTACTGCACCGACCAAGCCGGAACGATTGGTCTCGTAAACGCCGGCGAGTTCCTTCAGGACAAGTACGGCGGAGGGATGTTCCCTATATTGTATATATGGGGAATAGGGTTACTAGCAGCAGGACAGAGCAGTACTATTACTGGTACGTATGCAGGACAGTTTATTACCGAAGGGTTTCTGAAGCTGCGTTTGAAGAAATGGTTAAGAGCTTTGATCACGAGAAGCTTAGCGATTGTTCCGACCATGATTGTGGCTCTTGTGTTTAATACTTCTGAAGGATCTTTGGATACTTTGAATGAGTGGCTCAATGTGGTTCAGTCTATTCAGATTCCTTTTGCTCTTATTCCTCTTCTTACGTTGGTGTCTAAACAGGAGGTCATGGGGACATTCAGAATTGGACCTGTTGTGGAGAAAGTGGCATGGACAGTGGCAGTGGTGGTGATACTGGTATATGGATACATGTTGCTGGACTTCTTCCTCTCAGAAGTGAAGGGACTTGTGTATGGCTTGGTGGTGTTCCTTTGTGCAGCTTCTTGGTTATCATTCATTGCTTATTTGCTTCAACACAGCGGTGCCTTTTCCTCTTTCCTCCACACTAATTCTCCTCATTCTCGTCATCGCTTCTCCTCTCTTGCTGATGCCAATTAA 1692 0.4817 MSSNLQKLGHDDNKQVEQRRKEDEDADENVFLHQCETIPLSSPPPWRLPEPSRSATSHAEDNNEEVVHAEKVKVHIFDLESSSSSSSGMVVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIGGYSLLWLLMWTTIMGLLIQLLSARLGVATGRHLAELCQEEYGRWARLVLYVMAEMALIAADIQEVIGSAIAIKILSHGILPIWAGVVITALDSFVFLFLENYGVRKLEGVFAIFIGTMALSFAWMFLETKPSPKQLLIGILVPKVSSRTLRQAVELIGCVITPHNVFLHSALVQSRNINIHNKGQVQEALNYYTIESSLALLITFFINLSVMTVFARVFYCTDQAGTIGLVNAGEFLQDKYGGGMFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLRLKKWLRALITRSLAIVPTMIVALVFNTSEGSLDTLNEWLNVVQSIQIPFALIPLLTLVSKQEVMGTFRIGPVVEKVAWTVAVVVILVYGYMLLDFFLSEVKGLVYGLVVFLCAASWLSFIAYLLQHSGAFSSFLHTNSPHSRHRFSSLADAN 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1833 563 Pfam Natural resistance-associated macrophage protein 120 481 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1833 563 PRINTS Natural resistance-associated macrophage protein signature 178 204 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1833 563 PRINTS Natural resistance-associated macrophage protein signature 282 305 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1833 563 PRINTS Natural resistance-associated macrophage protein signature 389 408 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1833 563 PRINTS Natural resistance-associated macrophage protein signature 451 470 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1833 563 PRINTS Natural resistance-associated macrophage protein signature 208 227 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1833 563 PRINTS Natural resistance-associated macrophage protein signature 233 254 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1833 563 PRINTS Natural resistance-associated macrophage protein signature 417 434 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1833 563 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 80 536 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1833 563 MobiDBLite consensus disorder prediction 1 64 - -
Prci13g1833 563 NCBIfam Nramp family divalent metal transporter 104 473 - -
Prci13g1833 563 MobiDBLite consensus disorder prediction 10 31 - -
Prci13g1833 563 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 97 475 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci13g1833 563 Hamap Divalent metal cation transporter MntH [mntH]. 85 507 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1833 Prci-Chr13 32522622 32527144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1833 61 538 Inorganic Solute Cotransporters AT1G47240 71.130 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1833 K21398 - gmx:100801411 794.653