Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1824 ATGAGAATAATCCTTTATCGTCTCTTACGTCCTGACATGATAGCTGTTTTTCTGCTTCATATTTTTTTACTATGTCTTCCTCCTCCCTGCTTAGCCGGCGATACTTTGAAGATGGGTGGAAGGCTATTAGACAGTGAAAATGATTATTCCAATCTCATTTCAGATAGAGAACACTTTGAACTGGGTTTCTTTTCCCCTCCTGGGAGCAAAAACAGATACCTAGGAATATGGTATCATGGGAAAGAACCACAAACAGTTGTCTGGGTTGCTAACAGAGACAACCCCATCCCTGATTCGACATCTGGGATTTTTCAAATATCCCAAGATGGAAATCTCACAGTGTTAGATACAGACGGAAAACCTTATTGGTCTTACAGACCTGAACAAATATCTTCTCTCGCAAACCTGACTGTGAAGCTTATGGATACTGGGAATTTGCTTCTAGGAGACGATCAATTACAAGTGACCTACTGGCAAAGCTTCGAACACCCTACGGACACATTTCTGGTGGGCATGAGAATGTATAAAGATTTAGTCTTGACTTCTTGGAGAGCCACTAATGATCCCGGGACTGGCAAATTCTCGTTTGCAATGGGAAAAACAGGGGAAAGCCTCTATTCAATCTACACAAACCAAACCCAGCTTTACTGGGCAGGCGAAACACGCCAAGATTTCGGCGCCGAAGGAAAAATAATTTCGCTGTTGACAAACTTCACCCTAAGACCTACTACTTATAAAAGCAAAAACATGTCAGCATGGACAGTTCCTTCTGATTTTGGGTATGCAAGGCTAGTGATGAATTATACAGGAGCGGTACAGCTTTGGCAGTGGGATAATATCGGAGTTGGAGGATGGTTGTCCCCATGGCACGAGCCAGCTGAAAAATGCAATAGATATAACGTCTGTGGGAACTTCGGCAGTTGCAATATGAATAATTCGCCGTTCTGTAGATGTTTGCCCGGATTTAAGTCGCGGGGGGAGAATCAGATTCCGTCCTCTGAGTCTGGAGGGTGTTTCCAAAAAACAAAATCTTGCGGGCAAAACACAAAATTCATCGACTTGAAGAAGGTGAAAGTGAGAAAACCAGACAAACAAGTCATCGCAGCAAATGAAACAGAGTGCCGATCCAAGTGCCTCAATGGGTGCCCCTCTTGCACCGCTTACTCATATGATGCATTGAGAAATGTCTCTCGTAGTAGTTTCTTCACGTGTTTCATTTGGACTTCTGATTTACCTACTGTTCAAGAAGGGTTTGATCTCGGCTTTAATCTTTCTGTCCTGGTAAACATACCAGATATAGAACCAACTGCAAGAACGTGCAAACCATGCGGTGCATACGCGATTCCTTATCCGCTGAGCACTGATCCAAGTTGTGGTGATCCTATTTACTCCAATTTCAAATGCGACTTGCCAACCGGGCAGGTTCACTTCATTGTTGGAAACGAGAGTTTTAGAGTAACTAATATTGATCCAGACAAGAGATCCTTTTCTATTCAAATCAGTGATTCGTATGATTGCGCTGCAAACGATCTGGGGCATCGGGTTGCTCTGCCATTCAGTGCAACTCAACAGTGCAATGATGATGAAGAAGTCAAGATGCTAAATATTGATTGGGTTCCCCCAAATGAACCTCCTTGTAATAACTCTATAGACTGCAAGAACTGGCCTCATTCAACTTGCAATGTAACCAGAAATGCAAATGGAAGATGCCTCTGCGATAAAAACTATCAATGGAATGGCCTCAATTTAAGCTGTACACAAGAAAAGGGAAAAACTCAAAGAACAAGAGATAGCTTACATGACAGTGAGAGATATCTCAAAGATTTGATAGACGCTGAGAGATCAGAGGAAAAAGACAATGAAGGGATGGAGGTATCTTATTTGGATTTTAATAGCATCCTATTAGCTACAGATAATTTCTCAGATGTGAACAAGCTTGGACGGGGGGGTTATGGACCTGTCTACAAGGGAAAGCTTCCAGGTGGTCAAGATATTGCAGTAAAGAGGCTTTCAAGTGTTTCTTCACAAGGATTGAAGGAATTCAAGAATGAAGTTGTTTTGATATCCAAACTTCAACATCGAAACCTTGTCAAACTTCAAGGCTATTGCATAACTGGAGATGAAAAGATATTACTTTATGAATACATGCCAAACAAGAGCTTAGACACATTCTTATTTGATCGTACACAAAGAGTGATTTTGGATTGGCCAATGCGATTTGACATAATTCTAGGAGTTGCTAGAGGGATGTTATATCTTCACCAAGACTCTAGGTTGAGGGTGGTTCATAGAGATTTGAAAACAAGTAATATTCTTCTAGATGAAGATATGCAACCAAAAATTTCAGACTTTGGACTTGCAAAAATATTTGGTGGCAAGGAGACCGAGGCTAACACTGAGAGAGTAGTTGGAACTTATGGATATATGGCTCCAGAATATGCATTAGATGGATTTTTCTCGATTAAATCAGATGTTTTCAGTTTTGGCATAGTAATGCTTGAAATTATTAGTGGAAGAAAGAACACAGGATTTTTTCAATCCAAACAAGCTTCCAGCCTTCTGGGTTATGCATGGAGGCTATGGACAGAGAATAACTTGGTGGATTTGATGGATCGATCTCTAAGTGAAAGTTGCAATGCAAACCAATTTATTAAGTGTGCACAAGTTAGTCTATTGTGCGTACAAGATGAACCAGGAGACAGGCCCACCATGTCACAGGTACTGATAATGCTTGAAAGTGAGATTGCAAGCCTCCCAAATCCAAAGCAACCAACCTTTTTTATGACCAATGCTAGGGGCCTTTCTAGCTCTGCTTCTTCTTCCAGTAAACCTGAAGGAATTCTTCTAACTGATATTTCCTATCAAGAGGGTCGGTAG 2877 0.4126 MRIILYRLLRPDMIAVFLLHIFLLCLPPPCLAGDTLKMGGRLLDSENDYSNLISDREHFELGFFSPPGSKNRYLGIWYHGKEPQTVVWVANRDNPIPDSTSGIFQISQDGNLTVLDTDGKPYWSYRPEQISSLANLTVKLMDTGNLLLGDDQLQVTYWQSFEHPTDTFLVGMRMYKDLVLTSWRATNDPGTGKFSFAMGKTGESLYSIYTNQTQLYWAGETRQDFGAEGKIISLLTNFTLRPTTYKSKNMSAWTVPSDFGYARLVMNYTGAVQLWQWDNIGVGGWLSPWHEPAEKCNRYNVCGNFGSCNMNNSPFCRCLPGFKSRGENQIPSSESGGCFQKTKSCGQNTKFIDLKKVKVRKPDKQVIAANETECRSKCLNGCPSCTAYSYDALRNVSRSSFFTCFIWTSDLPTVQEGFDLGFNLSVLVNIPDIEPTARTCKPCGAYAIPYPLSTDPSCGDPIYSNFKCDLPTGQVHFIVGNESFRVTNIDPDKRSFSIQISDSYDCAANDLGHRVALPFSATQQCNDDEEVKMLNIDWVPPNEPPCNNSIDCKNWPHSTCNVTRNANGRCLCDKNYQWNGLNLSCTQEKGKTQRTRDSLHDSERYLKDLIDAERSEEKDNEGMEVSYLDFNSILLATDNFSDVNKLGRGGYGPVYKGKLPGGQDIAVKRLSSVSSQGLKEFKNEVVLISKLQHRNLVKLQGYCITGDEKILLYEYMPNKSLDTFLFDRTQRVILDWPMRFDIILGVARGMLYLHQDSRLRVVHRDLKTSNILLDEDMQPKISDFGLAKIFGGKETEANTERVVGTYGYMAPEYALDGFFSIKSDVFSFGIVMLEIISGRKNTGFFQSKQASSLLGYAWRLWTENNLVDLMDRSLSESCNANQFIKCAQVSLLCVQDEPGDRPTMSQVLIMLESEIASLPNPKQPTFFMTNARGLSSSASSSSKPEGILLTDISYQEGR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1824 958 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 605 715 - -
Prci13g1824 958 CDD EGF_CA 296 325 - -
Prci13g1824 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672|GO:0006468
Prci13g1824 958 SMART blect_4 33 164 IPR001480 -
Prci13g1824 958 CDD B_lectin 59 164 IPR001480 -
Prci13g1824 958 ProSiteProfiles Bulb-type lectin domain profile. 33 161 IPR001480 -
Prci13g1824 958 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 131 936 - -
Prci13g1824 958 Gene3D Phosphorylase Kinase; domain 1 604 715 - -
Prci13g1824 958 ProSiteProfiles Protein kinase domain profile. 640 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1824 958 SMART serkin_6 640 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1824 958 ProSiteProfiles PAN/Apple domain profile. 345 425 IPR003609 -
Prci13g1824 958 Pfam S-locus glycoprotein domain 236 324 IPR000858 GO:0048544
Prci13g1824 958 Gene3D - 31 162 IPR036426 -
Prci13g1824 958 SMART ntp_6 346 428 IPR003609 -
Prci13g1824 958 SUPERFAMILY Protein kinase-like (PK-like) 623 936 IPR011009 -
Prci13g1824 958 Pfam PAN-like domain 345 411 IPR003609 -
Prci13g1824 958 Pfam Protein tyrosine and serine/threonine kinase 644 908 IPR001245 GO:0004672|GO:0006468
Prci13g1824 958 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 716 919 - -
Prci13g1824 958 Pfam D-mannose binding lectin 85 178 IPR001480 -
Prci13g1824 958 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 161 - -
Prci13g1824 958 Gene3D Transferase(Phosphotransferase) domain 1 716 922 - -
Prci13g1824 958 CDD STKc_IRAK 646 912 - -
Prci13g1824 958 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 218 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1824 Prci-Chr13 32340170 32345032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1824 628 928 Receptor kinase-like Gene Family AT4G23140 56.678 1.05e-121 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci13g1824 PK_Tyr_Ser-Thr 8.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1824 - - pcin:129313312 1024.23