Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1823 ATGAGAATAATCCTTTATCGTCTCTTACGTCCTGACATGATAGCTGTTTTTCTGCTTCATATTTTTTTACTATGTCTTCCTCCTCCCTGCTTAGCCGGCGATACTTTGAAGATGGGTGGAAGGCTATTAGACAGTGAAAATGATTATTCCAATCTCATTTCAGATAGAGAACACTTTGAACTGGGTTTCTTTTCCCCTCCTGGGAGCAAAAACAGATACCTAGGAATATGGTATCATGGGAAAGAACCACAAACAGTTGTCTGGGTTGCTAACAGAGACAACCCCATCCCTGATTCGACATCTGGGATTTTTCAAATATCCCAAGATGGAAATCTCACAGTGTTAGATACAGACGGAAAACCTTATTGGTCTTACAGACCTGAACAAATATCTTCTCTCGCAAACCTGACTGTGAAGCTTATGGATACTGGGAATTTGCTTCTAGGAGACGATCAATTACAAGTGACCTACTGGCAAAGCTTCGAACACCCTACGGACACATTTCTGGTGGGCATGAGAATGTATAAAGATTTAGTCTTGACTTCTTGGAGAGCCACTAATGATCCCGGGACTGGCAAATTCTCGTTTGCAATGGGAAAAACAGGGGAAAGCCTCTATTCAATCTACACAAACCAAACCCAGCTTTACTGGGCAGGCGAAACACGCCAAGATTTCGGCGCCGAAGGAAAAATAATTTCGCTGTTGACAAACTTCACCCTAAGACCTACTACTTATAAAAGCAAAAACATGTCAGCATGGACAGTTCCTTCTGATTTTGGGTATGCAAGGCTAGTGATGAATTATACAGGAGCGGTACAGCTTTGGCAGTGGGATAATATCGGAGTTGGAGGATGGTTGTCCCCATGGCACGAGCCAGCTGAAAAATGCAATAGATATAACGTCTGTGGGAACTTCGGCAGTTGCAATATGAATAATTCGCCGTTCTGTAGATGTTTGCCCGGATTTAAGTCGCGGGGGGAGAATCAGATTCCGTCCTCTGAGTCTGGAGGGTGTTTCCAAAAAACAAAATCTTGCGGGCAAAACACAAAATTCATCGACTTGAAGAAGGTGAAAGTGAGAAAACCAGACAAACAAGTCATCGCAGCAAATGAAACAGAGTGCCGATCCAAGTGCCTCAATGGGTGCCCCTCTTGCACCGCTTACTCATATGATGCATTGAGAAATGTCTCTCGTAGTAGTTTCTTCACGTGTTTCATTTGGACTTCTGATTTACCTACTGTTCAAGAAGGGTTTGATCTCGGCTTTAATCTTTCTGTCCTGGTAAACATACCAGATATAGAACCAACTGCAAGAACGTGCAAACCATGCGGTGCATACGCGATTCCTTATCCGCTGAGCACTGATCCAAGTTGTGGTGATCCTATTTACTCCAATTTCAAATGCGACTTGCCAACCGGGCAGGTTCACTTCATTGTTGGAAACGAGAGTTTTAGAGTAACTAATATTGATCCAGACAAGAGATCCTTTTCTATTCAAATCAGTGATTCGTATGATTGCGCTGCAAACGATCTGGGGCATCGGGTTGCTCTGCCATTCAGTGCAACTCAACAGTGCAATGATGATGAAGAAGTCAAGATGCTAAATATTGATTGGGTTCCCCCAAATGAACCTCCTTGTAATAACTCTATAGACTGCAAGAACTGGCCTCATTCAACTTGCAATGTAACCAGAAATGCAAATGGAAGATGCCTCTGCGATAAAAACTATCAATGGAATGGCCTCAATTTAAGCTGTACACAAGAATCTCCAAGAAGAAACAATAAAACTTTGATACTTGCTGTGACATTTTCAAGCTTGATTTTATTTGCCTGCATTATTACTTCTGCTTATTTTTGGAGAAGAAAATTAGCCTTTGAGCAAGAAAAGGGAAAAACTCAAAGAACAAGAGATAGCTTACATGACAGTGAGAGATATCTCAAAGATTTGATAGACGCTGAGAGATCAGAGGAAAAAGACAATGAAGGGATGGAGGTATCTTATTTGGATTTTAATAGCATCCTATTAGCTACAGATAATTTCTCAGATGTGAACAAGCTTGGACGGGGGGGTTATGGACCTGTCTACAAGGGAAAGCTTCCAGGTGGTCAAGATATTGCAGTAAAGAGGCTTTCAAGTGTTTCTTCACAAGGATTGAAGGAATTCAAGAATGAAGTTGTTTTGATATCCAAACTTCAACATCGAAACCTTGTCAAACTTCAAGGCTATTGCATAACTGGAGATGAAAAGATATTACTTTATGAATACATGCCAAACAAGAGCTTAGACACATTCTTATTTGATCGTACACAAAGAGTGATTTTGGATTGGCCAATGCGATTTGACATAATTCTAGGAGTTGCTAGAGGGATGTTATATCTTCACCAAGACTCTAGGTTGAGGGTGGTTCATAGAGATTTGAAAACAAGTAATATTCTTCTAGATGAAGATATGCAACCAAAAATTTCAGACTTTGGACTTGCAAAAATATTTGGTGGCAAGGAGACCGAGGCTAACACTGAGAGAGTAGTTGGAACTTATGGATATATGGCTCCAGAATATGCATTAGATGGATTTTTCTCGATTAAATCAGATGTTTTCAGTTTTGGCATAGTAATGCTTGAAATTATTAGTGGAAGAAAGAACACAGGATTTTTTCAATCCAAACAAGCTTCCAGCCTTCTGGGTTATGCATGGAGGCTATGGACAGAGAATAACTTGGTGGATTTGATGGATCGATCTCTAAGTGAAAGTTGCAATGCAAACCAATTTATTAAGTGTGCACAAGTTAGTCTATTGTGCGTACAAGATGAACCAGGAGACAGGCCCACCATGTCACAGGTACTGATAATGCTTGAAAGTGAGATTGCAAGCCTCCCAAATCCAAAGCAACCAACCTTTTTTATGACCAATGCTAGGGGCCTTTCTAGCTCTGCTTCTTCTTCCAGTAAACCTGAAGGAATTCTTCTAACTGATATTTCCTATCAAGAGGGTCGGTAG 2997 0.4087 MRIILYRLLRPDMIAVFLLHIFLLCLPPPCLAGDTLKMGGRLLDSENDYSNLISDREHFELGFFSPPGSKNRYLGIWYHGKEPQTVVWVANRDNPIPDSTSGIFQISQDGNLTVLDTDGKPYWSYRPEQISSLANLTVKLMDTGNLLLGDDQLQVTYWQSFEHPTDTFLVGMRMYKDLVLTSWRATNDPGTGKFSFAMGKTGESLYSIYTNQTQLYWAGETRQDFGAEGKIISLLTNFTLRPTTYKSKNMSAWTVPSDFGYARLVMNYTGAVQLWQWDNIGVGGWLSPWHEPAEKCNRYNVCGNFGSCNMNNSPFCRCLPGFKSRGENQIPSSESGGCFQKTKSCGQNTKFIDLKKVKVRKPDKQVIAANETECRSKCLNGCPSCTAYSYDALRNVSRSSFFTCFIWTSDLPTVQEGFDLGFNLSVLVNIPDIEPTARTCKPCGAYAIPYPLSTDPSCGDPIYSNFKCDLPTGQVHFIVGNESFRVTNIDPDKRSFSIQISDSYDCAANDLGHRVALPFSATQQCNDDEEVKMLNIDWVPPNEPPCNNSIDCKNWPHSTCNVTRNANGRCLCDKNYQWNGLNLSCTQESPRRNNKTLILAVTFSSLILFACIITSAYFWRRKLAFEQEKGKTQRTRDSLHDSERYLKDLIDAERSEEKDNEGMEVSYLDFNSILLATDNFSDVNKLGRGGYGPVYKGKLPGGQDIAVKRLSSVSSQGLKEFKNEVVLISKLQHRNLVKLQGYCITGDEKILLYEYMPNKSLDTFLFDRTQRVILDWPMRFDIILGVARGMLYLHQDSRLRVVHRDLKTSNILLDEDMQPKISDFGLAKIFGGKETEANTERVVGTYGYMAPEYALDGFFSIKSDVFSFGIVMLEIISGRKNTGFFQSKQASSLLGYAWRLWTENNLVDLMDRSLSESCNANQFIKCAQVSLLCVQDEPGDRPTMSQVLIMLESEIASLPNPKQPTFFMTNARGLSSSASSSSKPEGILLTDISYQEGR 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1823 998 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 161 - -
Prci13g1823 998 SMART serkin_6 680 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1823 998 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 756 959 - -
Prci13g1823 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Prci13g1823 998 CDD PAN_AP_plant 344 411 - -
Prci13g1823 998 CDD EGF_CA 296 325 - -
Prci13g1823 998 SMART blect_4 33 164 IPR001480 -
Prci13g1823 998 Pfam S-locus glycoprotein domain 236 324 IPR000858 GO:0048544
Prci13g1823 998 Pfam PAN-like domain 345 411 IPR003609 -
Prci13g1823 998 CDD B_lectin 59 164 IPR001480 -
Prci13g1823 998 ProSiteProfiles Protein kinase domain profile. 680 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1823 998 ProSiteProfiles Bulb-type lectin domain profile. 33 161 IPR001480 -
Prci13g1823 998 Pfam D-mannose binding lectin 85 178 IPR001480 -
Prci13g1823 998 Gene3D Transferase(Phosphotransferase) domain 1 756 962 - -
Prci13g1823 998 Gene3D Phosphorylase Kinase; domain 1 644 755 - -
Prci13g1823 998 CDD STKc_IRAK 686 952 - -
Prci13g1823 998 SUPERFAMILY Protein kinase-like (PK-like) 663 976 IPR011009 -
Prci13g1823 998 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 132 976 - -
Prci13g1823 998 ProSiteProfiles PAN/Apple domain profile. 345 425 IPR003609 -
Prci13g1823 998 Pfam Protein tyrosine and serine/threonine kinase 684 948 IPR001245 GO:0004672|GO:0006468
Prci13g1823 998 SMART ntp_6 346 428 IPR003609 -
Prci13g1823 998 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 218 IPR036426 -
Prci13g1823 998 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 645 755 - -
Prci13g1823 998 Gene3D - 31 162 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1823 Prci-Chr13 32340170 32345032 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1823 668 968 Receptor kinase-like Gene Family AT4G23140 56.678 2.87e-121 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci13g1823 PK_Tyr_Ser-Thr 8.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1823 - - pcin:129313312 1068.14