Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1821 ATGAGAGCCGTTTCAATTGCTCTCTTCTCCTTCACGGGGTGGTTGCTGTGTTTTTGTCAACCCCATGTGGCTTCAGACACGTTAAATCCTGGCGAAAAGATAACTGCAAATGAAACCTTGGTTTCAAATGGTGGCAAATTTGAACTGGGTTTCTTTTCCCCTCGACAAGGTTCAACAAAATACTTAGGAATATGGTACAACGAGTCACAAGTACAGCCCCGAACGGTGGTATGGGTTGCAAACAGAGACAATCCTGTTCCAGACTCCACGGCATCTTTTCAAATCGCCGACGATGGAAACCTCCGAGTGTCAGACTCCAATGGAAAAGACTACTGGTCTTCCGGGCTCGAGGGATCTTCATCCTTAGACCGTACAGTGAAGCTCATGGATTCAGGAAACTTGGTACTCACAGATGACGAGGTCAGAATGAATAATCTCTGGCAGAGCTTCGAACATCCAACTGATACATTTCTTCCTTCCATGAAAATGGATAAAAACATGAACCTGACTTCTTGGAGAAGCTCTGACGACCCAGCCCCGGGGAACTACACTTTTCAGCTTGCTCAAACTGGGGACAACAGCTATAGAATTTTGAAAGACCAAGTCCGACTTCACTGGCAATCTTCAGACGAAATACCTGCGACAATGCCAAACCTCTTGACAAACGTCACCAGAAGCCCGGCATGTAACGTCACGAGGCAACATAAGTTGAAAAATAGCAAGACGTTACCAGTTCTGAATTCTACAAACCCGGTATATGATTGTGAAAGGCTAGTCATGAATTCTAAAAACCCGGTATATAAGCTTGAAAGGCTAGTCATGAATTACACAGGGAAGATCGAATTTCAGCGGTACATCAATGATACTGACGTAGGCGAATGGTCAACGAGGTTTAGTAAACCAGAAACGAAGTGCAGGATACATAATTACTGTGGGAGTTTCAGAAGCTGCAATGATCAGAATCGCCCTGTCTGTAAGTGTTTGCCTGGATTCGATTCCTTGCCAGCTAGGTATTCCTCCGGAGAACAGGATAATGGGTGTTTCAGAAAATCAACATGGTGTGGAAGAAGAAGAGAAGACATTACATTCTTAAACTTGACGATGGTTGAAGTGGGAGGCTCGGGCAAACAAGTGTTCCTCCAAGCAAAAAATGAAGCAGAATGCCAAGCTCAATGTCTTAACTGCTCTAATCAATGCCAGGCTTATTCGTTTACCGTTAGAATTTCGGACCGGAATCCGGCTTGCTTTATCTGGACTCAGGATTTACTTGCTCTCAATGAGGATTCCCCTCAAAATGGCATTTCTCTTTCTATCCCCTTACTGATTTCAGATATAGCATTAACTGCCAAAACCTGTAAACCTTGTGGCACAACAATAATTCCATATCCACTAAGCACGGGACCAGATTGTGGAGATCCCTCGTACTTCAAGTTAAATTGCATCAACACAACAAAAACAGGCCAGGTTAGCTTTAATCTGTCTGGAGTTGGGTTTTTGAGGGTATCCAAAATAGACCCAGATAATCGGAAGTTGCGAATCCAAACTAACAATAATGAGTCCATCAACTTCTGTGATAACCAAGATCAAAGACAACAAGTTAAGGTTGACTTACCATTTAATGTAACCGACTGGTGCTCTGCTGAAGATGAAATAGAGGTTAGTTGGCTACCACCATTAGAACCTCTCTGTCATAACTCCACAGACTGCAACGATTGGCCACATTCAACCTGCAACAACAATTCAAGAGATGGAAAACGAAGGTGCCTTTGTGATGCAAACTACTACTGGAACAACTCAAATTTAACTTGCATAGTCAGAGTAACTCTTTCAAGCGCGGCTTTCGTGGCATGCATTGTTGTTGCTGCTTATATATGGAAAAGCAAAATAGCCCATAAGAAAGACATGGGAAGAGTTCAGAGAGTTCGAGGCCGCATGTATGACAGCGAAAGACAGGTGAAGGATTTGATAGACTTGCAAGAACTAGAAGAAGATGACAACGAAGGCATAGAGGTGCCATACTATGATTTTGAAACCATACTAGCTGCTACTGATAATTTTTCAGATGCAAACAAGCTTGGACGAGGAGGTTATGGCCCTGTTTACAAGGGTATCCTACCAGGCGAACATCATATAGCAGTAAAGAGGCTTTCAAATGTTTCATCACAAGGTTTAAAGGAATTCAAGAATGAGGTTGTTTTGATATCCAAACTACAGCATCGGAATCTTGTCAGATTGCGGGGTTATTGCATAACTGGGGATGAAAAGATCTTACTCTATGAATACATGCCAAACAAGAGTTTGGATGCATTCTTGTTCGATCCTACACAAAGTGTGATTTTGGATTGGCAGATGCGGTTTGACATAATTTTAGGAGTTGTTCGAGGAATGCTATATCTTCATCAAGATTCTAGATTGAGAGTGATTCATAGAGATTTAAAAACCAGCAATATTCTTCTAGATGAAGAGATGCAACCAAAAATTTCAGACTTTGGTTTAGCAAGAATATTTGGAAGCAAAGAAATTGAGGCCAACACTGAAAGAATAGTTGGAACTTATGGTTATATGGCTCCAGAATATGCACTGGATGGATTATTTTCAATCAAATCAGATATCTTTAGCTTTGGCGTGGTGGTACTTGAAATTATCACCGGAAAGAAAAACACAGGATTCTTTCAATCCAAACAAGTTCCCAGCCTATTGGGTTATGCATGGAAGTTATGGACAGAGAATAAGCTATTGGATTTAATGGACCAATCTTTGGGAGAAAGCTGCAATGTAAGTCAATTCATCAAGTGCGCGCAAGTTAGTCTTCTATGTGTGCAAGATGAACCAGGAGACAGGCCCACAATGTCACAGGTACTGATAATGCTTGAAAGCGAGACTGCTAGTCTCCCAACTCCAAAACAACCAACCTTTTTTATGAGTAGAGACAGAGGCATTTCAAGCACAGCTTCTTCTTCTAGTAAACCTGAAGGAATTCTATCAACCCAGAATACCTATCAGGAAGGTCGATAA 3015 0.4186 MRAVSIALFSFTGWLLCFCQPHVASDTLNPGEKITANETLVSNGGKFELGFFSPRQGSTKYLGIWYNESQVQPRTVVWVANRDNPVPDSTASFQIADDGNLRVSDSNGKDYWSSGLEGSSSLDRTVKLMDSGNLVLTDDEVRMNNLWQSFEHPTDTFLPSMKMDKNMNLTSWRSSDDPAPGNYTFQLAQTGDNSYRILKDQVRLHWQSSDEIPATMPNLLTNVTRSPACNVTRQHKLKNSKTLPVLNSTNPVYDCERLVMNSKNPVYKLERLVMNYTGKIEFQRYINDTDVGEWSTRFSKPETKCRIHNYCGSFRSCNDQNRPVCKCLPGFDSLPARYSSGEQDNGCFRKSTWCGRRREDITFLNLTMVEVGGSGKQVFLQAKNEAECQAQCLNCSNQCQAYSFTVRISDRNPACFIWTQDLLALNEDSPQNGISLSIPLLISDIALTAKTCKPCGTTIIPYPLSTGPDCGDPSYFKLNCINTTKTGQVSFNLSGVGFLRVSKIDPDNRKLRIQTNNNESINFCDNQDQRQQVKVDLPFNVTDWCSAEDEIEVSWLPPLEPLCHNSTDCNDWPHSTCNNNSRDGKRRCLCDANYYWNNSNLTCIVRVTLSSAAFVACIVVAAYIWKSKIAHKKDMGRVQRVRGRMYDSERQVKDLIDLQELEEDDNEGIEVPYYDFETILAATDNFSDANKLGRGGYGPVYKGILPGEHHIAVKRLSNVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCITGDEKILLYEYMPNKSLDAFLFDPTQSVILDWQMRFDIILGVVRGMLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLARIFGSKEIEANTERIVGTYGYMAPEYALDGLFSIKSDIFSFGVVVLEIITGKKNTGFFQSKQVPSLLGYAWKLWTENKLLDLMDQSLGESCNVSQFIKCAQVSLLCVQDEPGDRPTMSQVLIMLESETASLPTPKQPTFFMSRDRGISSTASSSSKPEGILSTQNTYQEGR 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1821 1004 SMART blect_4 31 153 IPR001480 -
Prci13g1821 1004 ProSiteProfiles PAN/Apple domain profile. 354 441 IPR003609 -
Prci13g1821 1004 MobiDBLite consensus disorder prediction 974 1004 - -
Prci13g1821 1004 SMART serkin_6 686 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1821 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Prci13g1821 1004 SUPERFAMILY Protein kinase-like (PK-like) 668 983 IPR011009 -
Prci13g1821 1004 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Prci13g1821 1004 Pfam S-locus glycoprotein domain 267 332 IPR000858 GO:0048544
Prci13g1821 1004 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 651 761 - -
Prci13g1821 1004 Pfam Protein tyrosine and serine/threonine kinase 690 954 IPR001245 GO:0004672|GO:0006468
Prci13g1821 1004 CDD STKc_IRAK 692 958 - -
Prci13g1821 1004 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 762 965 - -
Prci13g1821 1004 ProSiteProfiles Protein kinase domain profile. 686 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1821 1004 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 118 983 - -
Prci13g1821 1004 Gene3D - 20 151 IPR036426 -
Prci13g1821 1004 Pfam D-mannose binding lectin 75 168 IPR001480 -
Prci13g1821 1004 Pfam PAN-like domain 362 423 IPR003609 -
Prci13g1821 1004 Gene3D Phosphorylase Kinase; domain 1 649 761 - -
Prci13g1821 1004 CDD B_lectin 34 153 IPR001480 -
Prci13g1821 1004 Gene3D Transferase(Phosphotransferase) domain 1 762 969 - -
Prci13g1821 1004 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 178 IPR036426 -
Prci13g1821 1004 FunFam Receptor-like serine/threonine-protein kinase SD1-8 20 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1821 Prci-Chr13 32306413 32310791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1821 664 974 Receptor kinase-like Gene Family AT4G23140 56.151 2.94e-123 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci13g1821 PK_Tyr_Ser-Thr 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1821 - - pcin:129313312 1509.58