Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1820 ATGAGAGCCGTTTCAATTGCTCTCTTCTCCTTCACGGGGTGGTTGCTGTGTTTTTGTCAACCCCATGTGGCTTCAGACACGTTAAATCCTGGCGAAAAGATAACTGCAAATGAAACCTTGGTTTCAAATGGTGGCAAATTTGAACTGGGTTTCTTTTCCCCTCGACAAGGTTCAACAAAATACTTAGGAATATGGTACAACGAGTCACAAGTACAGCCCCGAACGGTGGTATGGGTTGCAAACAGAGACAATCCTGTTCCAGACTCCACGGCATCTTTTCAAATCGCCGACGATGGAAACCTCCGAGTGTCAGACTCCAATGGAAAAGACTACTGGTCTTCCGGGCTCGAGGGATCTTCATCCTTAGACCGTACAGTGAAGCTCATGGATTCAGGAAACTTGGTACTCACAGATGACGAGGTCAGAATGAATAATCTCTGGCAGAGCTTCGAACATCCAACTGATACATTTCTTCCTTCCATGAAAATGGATAAAAACATGAACCTGACTTCTTGGAGAAGCTCTGACGACCCAGCCCCGGGGAACTACACTTTTCAGCTTGCTCAAACTGGGGACAACAGCTATAGAATTTTGAAAGACCAAGTCCGACTTCACTGGCAATCTTCAGACGAAATACCTGCGACAATGCCAAACCTCTTGACAAACGTCACCAGAAGCCCGGCATGTAACGTCACGAGGCAACATAAGTTGAAAAATAGCAAGACGTTACCAGTTCTGAATTCTACAAACCCGGTATATGATTGTGAAAGGCTAGTCATGAATTCTAAAAACCCGGTATATAAGCTTGAAAGGCTAGTCATGAATTACACAGGGAAGATCGAATTTCAGCGGTACATCAATGATACTGACGTAGGCGAATGGTCAACGAGGTTTAGTAAACCAGAAACGAAGTGCAGGATACATAATTACTGTGGGAGTTTCAGAAGCTGCAATGATCAGAATCGCCCTGTCTGTAAGTGTTTGCCTGGATTCGATTCCTTGCCAGCTAGGTATTCCTCCGGAGAACAGGATAATGGGTGTTTCAGAAAATCAACATGGTGTGGAAGAAGAAGAGAAGACATTACATTCTTAAACTTGACGATGGTTGAAGTGGGAGGCTCGGGCAAACAAGTGTTCCTCCAAGCAAAAAATGAAGCAGAATGCCAAGCTCAATGTCTTAACTGCTCTAATCAATGCCAGGCTTATTCGTTTACCGTTAGAATTTCGGACCGGAATCCGGCTTGCTTTATCTGGACTCAGGATTTACTTGCTCTCAATGAGGATTCCCCTCAAAATGGCATTTCTCTTTCTATCCCCTTACTGATTTCAGATATAGCATTAACTGCCAAAACCTGTAAACCTTGTGGCACAACAATAATTCCATATCCACTAAGCACGGGACCAGATTGTGGAGATCCCTCGTACTTCAAGTTAAATTGCATCAACACAACAAAAACAGGCCAGGTTAGCTTTAATCTGTCTGGAGTTGGGTTTTTGAGGGTATCCAAAATAGACCCAGATAATCGGAAGTTGCGAATCCAAACTAACAATAATGAGTCCATCAACTTCTGTGATAACCAAGATCAAAGACAACAAGTTAAGGTTGACTTACCATTTAATGTAACCGACTGGTGCTCTGCTGAAGATGAAATAGAGGTTAGTTGGCTACCACCATTAGAACCTCTCTGTCATAACTCCACAGACTGCAACGATTGGCCACATTCAACCTGCAACAACAATTCAAGAGATGGAAAACGAAGGTGCCTTTGTGATGCAAACTACTACTGGAACAACTCAAATTTAACTTGCATAGTCAGAGATGTCCTTCCCGGGGCACTAGGGTCGTCTGGAAGCAAAAACCCTCTCACTAAATTAATCCTTGTAGTAACTCTTTCAAGCGCGGCTTTCGTGGCATGCATTGTTGTTGCTGCTTATATATGGAAAAGCAAAATAGCCCATAAGAAAGACATGGGAAGAGTTCAGAGAGTTCGAGGCCGCATGTATGACAGCGAAAGACAGGTGAAGGATTTGATAGACTTGCAAGAACTAGAAGAAGATGACAACGAAGGCATAGAGGTGCCATACTATGATTTTGAAACCATACTAGCTGCTACTGATAATTTTTCAGATGCAAACAAGCTTGGACGAGGAGGTTATGGCCCTGTTTACAAGGGTATCCTACCAGGCGAACATCATATAGCAGTAAAGAGGCTTTCAAATGTTTCATCACAAGGTTTAAAGGAATTCAAGAATGAGGTTGTTTTGATATCCAAACTACAGCATCGGAATCTTGTCAGATTGCGGGGTTATTGCATAACTGGGGATGAAAAGATCTTACTCTATGAATACATGCCAAACAAGAGTTTGGATGCATTCTTGTTCGATCCTACACAAAGTGTGATTTTGGATTGGCAGATGCGGTTTGACATAATTTTAGGAGTTGTTCGAGGAATGCTATATCTTCATCAAGATTCTAGATTGAGAGTGATTCATAGAGATTTAAAAACCAGCAATATTCTTCTAGATGAAGAGATGCAACCAAAAATTTCAGACTTTGGTTTAGCAAGAATATTTGGAAGCAAAGAAATTGAGGCCAACACTGAAAGAATAGTTGGAACTTATGGTTATATGGCTCCAGAATATGCACTGGATGGATTATTTTCAATCAAATCAGATATCTTTAGCTTTGGCGTGGTGGTACTTGAAATTATCACCGGAAAGAAAAACACAGGATTCTTTCAATCCAAACAAGTTCCCAGCCTATTGGGTTATGCATGGAAGTTATGGACAGAGAATAAGCTATTGGATTTAATGGACCAATCTTTGGGAGAAAGCTGCAATGTAAGTCAATTCATCAAGTGCGCGCAAGTTAGTCTTCTATGTGTGCAAGATGAACCAGGAGACAGGCCCACAATGTCACAGGTACTGATAATGCTTGAAAGCGAGACTGCTAGTCTCCCAACTCCAAAACAACCAACCTTTTTTATGAGTAGAGACAGAGGCATTTCAAGCACAGCTTCTTCTTCTAGTAAACCTGAAGGAATTCTATCAACCCAGAATACCTATCAGGAAGGTCGATAA 3081 0.42 MRAVSIALFSFTGWLLCFCQPHVASDTLNPGEKITANETLVSNGGKFELGFFSPRQGSTKYLGIWYNESQVQPRTVVWVANRDNPVPDSTASFQIADDGNLRVSDSNGKDYWSSGLEGSSSLDRTVKLMDSGNLVLTDDEVRMNNLWQSFEHPTDTFLPSMKMDKNMNLTSWRSSDDPAPGNYTFQLAQTGDNSYRILKDQVRLHWQSSDEIPATMPNLLTNVTRSPACNVTRQHKLKNSKTLPVLNSTNPVYDCERLVMNSKNPVYKLERLVMNYTGKIEFQRYINDTDVGEWSTRFSKPETKCRIHNYCGSFRSCNDQNRPVCKCLPGFDSLPARYSSGEQDNGCFRKSTWCGRRREDITFLNLTMVEVGGSGKQVFLQAKNEAECQAQCLNCSNQCQAYSFTVRISDRNPACFIWTQDLLALNEDSPQNGISLSIPLLISDIALTAKTCKPCGTTIIPYPLSTGPDCGDPSYFKLNCINTTKTGQVSFNLSGVGFLRVSKIDPDNRKLRIQTNNNESINFCDNQDQRQQVKVDLPFNVTDWCSAEDEIEVSWLPPLEPLCHNSTDCNDWPHSTCNNNSRDGKRRCLCDANYYWNNSNLTCIVRDVLPGALGSSGSKNPLTKLILVVTLSSAAFVACIVVAAYIWKSKIAHKKDMGRVQRVRGRMYDSERQVKDLIDLQELEEDDNEGIEVPYYDFETILAATDNFSDANKLGRGGYGPVYKGILPGEHHIAVKRLSNVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCITGDEKILLYEYMPNKSLDAFLFDPTQSVILDWQMRFDIILGVVRGMLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLARIFGSKEIEANTERIVGTYGYMAPEYALDGLFSIKSDIFSFGVVVLEIITGKKNTGFFQSKQVPSLLGYAWKLWTENKLLDLMDQSLGESCNVSQFIKCAQVSLLCVQDEPGDRPTMSQVLIMLESETASLPTPKQPTFFMSRDRGISSTASSSSKPEGILSTQNTYQEGR 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1820 1026 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 784 987 - -
Prci13g1820 1026 MobiDBLite consensus disorder prediction 996 1026 - -
Prci13g1820 1026 Pfam D-mannose binding lectin 75 168 IPR001480 -
Prci13g1820 1026 SMART blect_4 31 153 IPR001480 -
Prci13g1820 1026 ProSiteProfiles PAN/Apple domain profile. 354 441 IPR003609 -
Prci13g1820 1026 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 178 IPR036426 -
Prci13g1820 1026 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 673 783 - -
Prci13g1820 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 829 841 IPR008271 GO:0004672|GO:0006468
Prci13g1820 1026 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Prci13g1820 1026 Pfam Protein tyrosine and serine/threonine kinase 712 976 IPR001245 GO:0004672|GO:0006468
Prci13g1820 1026 ProSiteProfiles Protein kinase domain profile. 708 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1820 1026 Gene3D - 20 151 IPR036426 -
Prci13g1820 1026 SMART serkin_6 708 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1820 1026 Pfam S-locus glycoprotein domain 267 332 IPR000858 GO:0048544
Prci13g1820 1026 Gene3D Phosphorylase Kinase; domain 1 671 783 - -
Prci13g1820 1026 Pfam PAN-like domain 362 423 IPR003609 -
Prci13g1820 1026 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 118 1005 - -
Prci13g1820 1026 CDD STKc_IRAK 714 980 - -
Prci13g1820 1026 FunFam Receptor-like serine/threonine-protein kinase SD1-8 20 150 - -
Prci13g1820 1026 SUPERFAMILY Protein kinase-like (PK-like) 690 1005 IPR011009 -
Prci13g1820 1026 CDD B_lectin 34 153 IPR001480 -
Prci13g1820 1026 Gene3D Transferase(Phosphotransferase) domain 1 784 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1820 Prci-Chr13 32306413 32310791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1820 686 996 Receptor kinase-like Gene Family AT4G23140 56.151 6.16e-123 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci13g1820 PK_Tyr_Ser-Thr 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1820 - - pcin:129313312 1521.52