Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci13g1804 | ATGCTGTTGGGGCAAGCTCCTCCTGCGAACTTCATAGCCAAACCCAATTGCATGGAATTGCAGATTCAAAGCCATGCGCGTCTCTTCTCCTTTGCTCAGACTTGTTTCTGTGACACCCCATGTACGAAAATGCAGCGAAGAGGTGTTGGAAATGCATTTCTCGTTAGAGCTGGCTATTCTCCCACGCCCAAAGATGTTCTCTCTTGGAACTCTAACACCGCCGACGATGGTTTGAGCTCGAATGTAGAGAATTTATCAGATATAAGCATAGTAGCTGAAGGCCTTGAGCGTGATTCAGTTCTTACAAATAGTGATTCTACAATAAAATCTAAGGCGAGGTTATCTGGAAGTTTTGGTAAACTGAAAGCACAGAAGGTTAAGGCCCTCATCCACAGAACTATTCACAAAAAGCAGGAAAGAAGCATTAATGATGATAACCTAGTTGTAGAACATCCAGAACTAGAAATAGAAGATGATTGGGAACAATATGAAAACAGTGCAAGTCAGGGATCTAATTCCCATGTAGGACGTCAGAATAAACCCAATAAATCTCAAAACAATGACATCAGAATAGCGAGTTCAGGTATATTAGTTGAAAGACATTCTGCCTCTCATTTAAAAGGATGGGGTTGTGAACAATCTTCACGTCCTTTTAGGACTGAATCACAAAAACTGGTAAAGGAGAAGAGAAAAGCATTGACTGACAATGACTTTTTCAGCCGAAAGTCTTTCAAAGATCTAGGTTACAGTGACTACATGATTGAATCTCTGCAAAAGCAAATTTTTCTCCGGCCTTCACATATACAGGCTATGGCATTTGAACCAGTATATACCGGAAAGAGTTGTATAATAGCTGATCAAAGTGGTTCTGGCAAGACTTTAGCATATCTTGCACCGATAATTCAGAAGCTTAGACAAGAAGAATTGGAAGGAATTGCCAATTTCTCTTCACAAGCTCCTCGAGTTGTTATATTGGCACCAACAGCTGAGTTAGCTTCTCAGGTGTTAGCTAATTGTCGATCAATGTCAAAATCTGGGGTTCCATTCAAATCTATGGTTGTAACAGGTGGCTTTCGACAGAGAACTCAACTAGAGAATTTAGAGCAGGGTGTTGATGTTTTAATAGCGACACCTGGCCGTTTTATGTTCCTCATCAAGGAAGGCTTGTTGCAATTAACAAATTTAAGATGTGCGGTGTTAGATGAGGTAGATATCCTTTTTGGTGATGAGGATTTTGAAGTGGCGCTTCAGTGCTTGATTAATTCTTCACCAGTTGCCACACAATATTTATTTGTGACTGCAACTTTGCCAAAAGATATTTACAATAAACTAATTGAAGTTTTTCCTGATTGTCAAGTGATCATGGGACCCGGTATGCATCGGATAAGCTCTCGGCTTGAGGAGGTTTTAGTTGATTGCAGTGGGGCCGATGGGGAAGAAAAATCTCCTGATACTGCATTTCTTAATAAGAAAACAGCTCTTCTACAGATTGCAGAAGGAAGTCATGTCCCAAAAACCATTGTGTTCTGCAACAAAATTGAAACCTGCAGAAAAGTTGAGAATGCATTGAAACGTTTTGATAGGAAAGAGACTCGTGTACAAGTTCTACCTTTCCATGCTGCCATGACACAGGAATTACGGATTGCTAATATGGAAAAGTTTACACGTTCTCAGACAAAGGAAGTCTCCCAGTTTCTGGTTTGCACAGACAGAGCATCACGAGGGATTGACTTTAGTGGAGTGGATCATGTTGTACTTTTTGACTTCCCGCGTGATCCAAGTGAATATGTCCGCCGCGTCGGAAGAACTGCAAGAGGTGCTGCTGGGAAGGGCAAGGCATATATCTTTGTGGTTGGCAAGCAAGCCCTTGCACGTAAAATCATGGATAGGAATAAGAAGGGTCATCCTCTTCACGATGTTCCTTCAGCCTATGAGCTGATGAAGTAG | 1947 | 0.414 | MLLGQAPPANFIAKPNCMELQIQSHARLFSFAQTCFCDTPCTKMQRRGVGNAFLVRAGYSPTPKDVLSWNSNTADDGLSSNVENLSDISIVAEGLERDSVLTNSDSTIKSKARLSGSFGKLKAQKVKALIHRTIHKKQERSINDDNLVVEHPELEIEDDWEQYENSASQGSNSHVGRQNKPNKSQNNDIRIASSGILVERHSASHLKGWGCEQSSRPFRTESQKLVKEKRKALTDNDFFSRKSFKDLGYSDYMIESLQKQIFLRPSHIQAMAFEPVYTGKSCIIADQSGSGKTLAYLAPIIQKLRQEELEGIANFSSQAPRVVILAPTAELASQVLANCRSMSKSGVPFKSMVVTGGFRQRTQLENLEQGVDVLIATPGRFMFLIKEGLLQLTNLRCAVLDEVDILFGDEDFEVALQCLINSSPVATQYLFVTATLPKDIYNKLIEVFPDCQVIMGPGMHRISSRLEEVLVDCSGADGEEKSPDTAFLNKKTALLQIAEGSHVPKTIVFCNKIETCRKVENALKRFDRKETRVQVLPFHAAMTQELRIANMEKFTRSQTKEVSQFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTARGAAGKGKAYIFVVGKQVXLARKIMDRNKKGHPLHDVPSAYELMK | 649 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci13g1804 | 649 | MobiDBLite | consensus disorder prediction | 163 | 190 | - | - | |
Prci13g1804 | 649 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 489 | 649 | IPR001650 | - | |
Prci13g1804 | 649 | CDD | SF2_C_DEAD | 489 | 617 | - | - | |
Prci13g1804 | 649 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. | 244 | 569 | IPR014013 | GO:0005524 | |
Prci13g1804 | 649 | CDD | DEADc | 253 | 442 | - | - | |
Prci13g1804 | 649 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | 160 | 646 | - | - | |
Prci13g1804 | 649 | Pfam | Helicase conserved C-terminal domain | 492 | 606 | IPR001650 | - | |
Prci13g1804 | 649 | SMART | helicmild6 | 517 | 607 | IPR001650 | - | |
Prci13g1804 | 649 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 242 | 270 | IPR014014 | GO:0003724 | |
Prci13g1804 | 649 | Gene3D | - | 210 | 454 | IPR027417 | - | |
Prci13g1804 | 649 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 276 | 618 | IPR027417 | - | |
Prci13g1804 | 649 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 273 | 454 | IPR014001 | - | |
Prci13g1804 | 649 | Gene3D | - | 482 | 646 | IPR027417 | - | |
Prci13g1804 | 649 | MobiDBLite | consensus disorder prediction | 158 | 190 | - | - | |
Prci13g1804 | 649 | SMART | ultradead3 | 261 | 469 | IPR014001 | - | |
Prci13g1804 | 649 | Pfam | DEAD/DEAH box helicase | 267 | 440 | IPR011545 | GO:0003676|GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci13g1804 | Prci-Chr13 | 31974191 | 31981537 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci13g1804 | 243 | 628 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 27.436 | 7.98e-28 | 114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci13g1804 | K13179 | - | qsa:O6P43_017081 | 752.281 |