Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1798 ATGTCGTCTTCCTCCTTAGCCGCAGCCCCAACACACGAAGTGTTCATCAGCGTCCAAAACGACGATCCATCGAAGTACATCGCAGACATGATCGACAGATCTCTGACGCTTCGAGGCGTCCCAACGTTCAAGGACGAGAGGCGTCTGAGAGAGAAGCAGAAAGGCACGAACCTTGGGAGAGATCTGAAGGAAGCGATAGCGATGTCCAAGATTTCAATCGTGATGCTATCGGAAAACTACGTTTATTCGAGCTGGTGTTTAGAGGAGCTTGTGGTGATTCTGCAGAATCGGCAGAAATGGGGATTGATTGTGTTGCCGATCTTCTACGAGATGGATCCGTCTGACATAAGGAAGCAGAGAGGCGATGCCTTTAAGATTGTGAACGCTCAGAGGAAAGGAGGAGTATGGGAGAAAAGATGGAAATCTGCTCTCAAAGAAGCTGCTAATTTGTGTGGCTGGGATCATCGGGGAAGCAATAGGATTGAATCACTTCTGGTGGGTAAACTAGTTGAAGACATTGTGAACAAAAGAATACCCACAAACCTCAGCATTTCCATCTATCCTCTGAGATATGACACAATACATCAATACCTGAACATGTTCCTGCAAGTGGGCATGCATGATGTACTTGTGGTAGGCATATGTGGTGAAAGTGGGATGGGAAAGACAGTAATTGCAAGAGCAATTTATGACCAAATCTCATTCACATTTGAAGGAAGCAGTTTCCTTGAAAATGTTGGCCAGAAAACAAGAATGCCTGATGGTTTAGTTCAGTTGCAGGAGAAGCTTCTGTCTGACACTCTTTCTACAGAAAGTAAAGTGGGAAATGTGAGCAGAGGAATGGATATGATCGAGAAGAAACTGTGCTCAAGGAGGGTTTTGATTGTTGTGGATGGTGTGGATGATCTCGAGCAACTATATGCATTGGTTTGGAATAGGAGTTGGTTTGGTTTGGGAAGTAAAATCATCATAACAACAAGAACCAGAGATCTGTGGTTGCTAAATAAACTTGGCGTAGATCAAGTGTACTTGGCTCAAGGTCTTCCCTTACCCTCCAATATACAGACCATCTGGAATCAATTTCAACTTAGTAATCATATGATTGCTGGACTCAAGCACTACATACTGCTACTTCAGCAAACGACAATTGAAAGAGAGAGGAATCTGCGGCAATATCGGCTGAAACTACGCCAAAAGAATGCCATCCAGGAACAAGTTATAGCCAACTTAAAACAAACTCAAGGAATTGGCTTGATTAAAGACAAATGA 1269 0.4366 MSSSSLAAAPTHEVFISVQNDDPSKYIADMIDRSLTLRGVPTFKDERRLREKQKGTNLGRDLKEAIAMSKISIVMLSENYVYSSWCLEELVVILQNRQKWGLIVLPIFYEMDPSDIRKQRGDAFKIVNAQRKGGVWEKRWKSALKEAANLCGWDHRGSNRIESLLVGKLVEDIVNKRIPTNLSISIYPLRYDTIHQYLNMFLQVGMHDVLVVGICGESGMGKTVIARAIYDQISFTFEGSSFLENVGQKTRMPDGLVQLQEKLLSDTLSTESKVGNVSRGMDMIEKKLCSRRVLIVVDGVDDLEQLYALVWNRSWFGLGSKIIITTRTRDLWLLNKLGVDQVYLAQGLPLPSNIQTIWNQFQLSNHMIAGLKHYILLLQQTTIERERNLRQYRLKLRQKNAIQEQVIANLKQTQGIGLIKDK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1798 422 Gene3D - 173 336 IPR027417 -
Prci13g1798 422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 352 IPR027417 -
Prci13g1798 422 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 153 IPR035897 -
Prci13g1798 422 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 346 IPR044974 GO:0006952
Prci13g1798 422 PRINTS Disease resistance protein signature 211 226 - -
Prci13g1798 422 PRINTS Disease resistance protein signature 287 301 - -
Prci13g1798 422 ProSiteProfiles TIR domain profile. 10 177 IPR000157 GO:0007165
Prci13g1798 422 Pfam NB-ARC domain 204 331 IPR002182 GO:0043531
Prci13g1798 422 SMART till_3 11 150 IPR000157 GO:0007165
Prci13g1798 422 Gene3D - 7 172 IPR035897 -
Prci13g1798 422 Pfam TIR domain 12 179 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1798 Prci-Chr13 31931205 31935565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1798 64 354 WRKY Transcription Factor Family AT4G12020 26.014 6.30e-23 100