Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1796 ATGTCTTCTTCCCGGCGCTCATCCTCCAAATCCAAATCCAAGTCTAAATACGAAGTTAATTGGACAAACGATGTGTTCCTGAGTTTCAGAGGAGAAGACACTCGGAAGGGTTTCATTTCTCATCTTCATTCATCTCTCAGTCATGCTGGAATTCACGCTTTTCAGGATGAAGATCACGAGTCATTAGAAAGGGGCGATGTGATTGCTGACGAACTGCATGAAAGCATCTCCAGCTCAACAATTTCAATCGTTGTTTTCTCAATCAACTATGGCGGCTCCGAATGGTGCTTAGGAGAACTGGAAAAAATCATGGAATGTCACAGAACTATCGGTCAGGTGGTTCTGCCTGTGTTCTATGATGTTGATCCGTCAGATGTACGCAAACAGAGAGGTCGTTTTGGGGAAGCATTCAATCGATGTTTACTGTACACCAGTAATGAGAAGATGTGGCGTTGGAGGCATGCTCTCACTGCAGCTGCCAATCTTGCCGGATTTGATTTGAAGAATTTCAGGAGTGAACGCTTGGTGATCAAGAATATTACTGACTCTATTTTGAGAATACTAGATAGCACCTACTTGTTTGTCGCTGACCATCCAGTGGGAGTAGATTCTCGTGTGCATGACATGATTGAACTGTTAACTGGTCCCTCAACTAAAGTTCTAATTGTTGGAATTTGGGGGATGGGAGGGATGGGCAAAAGCACTATAGCCAAGGCTGTTTACAATGAAATGTGTCATCATTTTGAGGGGAGCAGTTTCCTTGAAAATATCAGAGAAGTTTGGGAGCAAGACAATGGTCAAATATATTTGCAACAACAACTTCTTTCAGATATTCTTAAGACAGAAAAGATGAAATTTCATAGCTCTGCACGGGGCAAATCGCTGTTGAAAGAAAAACTTTGCCATAAGAAGACACTTGTTGTACTTGATGATGTGAATAATTTGGACCAGCTTAATGCATTGTGTGGAAGCCATGAATGGTTTGGTCCAGGAAGTAGATTAATCATTACAACTAGAGATGAGCATCTACTCAATGTCCTTAAAGTGGATAGCATATATAGAATGAAAGACATGAACACAAAGCGAAGCCTAGTAACTGTTGATATGAAAAATAGGCTTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATCATTCGTAAAAAATCACCAAAAGAGCTTGAGAAGCGTAGTAGATTATGGTTCTATGAAGATGCCTATAGTGTGCTCAAGAAACATACTGGGACTATATCCATTGAGGGATTGGCTTTGAAGTTGCCCAGAAATAATAGAGTTTGTTTAAGCACCGAAGCATTTAAGGAGATGAAGAAGCTGAGATTGCTTCAACTTGATCATGTTCAACTGGAGGGAGATTTTGAATGTCTTTCGAAAGACCTCAAATGGCTCAGTTGGCGTAGGTTTCCATTGAGATATATTCCTGGCACTTTTCATCAAGGAAGTTTAGTTGCTATTGACTTAAAATACAGCAATCTCTATCAAATTTGGAAGGAACCCCAGTTGCTCAGCAAGTTGAAGGTCCTCAATCTGAGTCATTCCTTTTACTTGATCCAATCTCCTGATTTCTCAAATCTGCCTCATCTTGAAGTTCTAATACTCAAATATTGTTCAAGTTTGTCTATGGTGCACCACTCCATTGGAGATCTAAAAAATCTTACTTTGGTAAACTTGAAGGGCTGCACAAGCCTTACTAATCTCCCAACAACGATCTATAAGTCAAAATCTTTGAAGGTTCTCCTCCTGTCTGATTGTTTAAAGATTGATAAGTTGGAGGAAGACATAGGGCAGGTGCAATCTTTGACTACTCTGATTGCAAATAACACAGCAATAAGACAAGTTCCCTATTCAATTGTAAGATTGAAAAACATTGGGTATATATCTGTGTGTGGCTTTGAAGGTTTAACAGGTGATGTGTTTCCTTCTCTCATTTGGTCATGGATGTCACCAACAAATAATCCCTTGTCCTTTGTTCAAGCGTCTAAGAGCATGTCATCTCTCGTTTCTTCAGAAGCACAAGCTAATAGTTTTCATGATCTACCATCACTGCTTACTGGCCTTTCAAAGACTCGAAGCCTTCAGATTGAATCCTTCTCAGAGCTACAGCTTACTCAAGATATAGAAAGAGTTTTAGATTCAATATACGCCACAAATGGTGTTGAATTGGAAACCCCAAATGCATCACAAGTTTCATGCATGGAAACATCTACTTCAACTCCTTGTGGCAATCAGTTTCACATTTCAAGTTCGGAAAATTCCTTGAGATCCATTTTGATTCAAATGGGACAGAGCAGCCAAGTCACAATAACTCTTAGTGAGGCAATTTCGCAGGTATTAACTACTAACAGGTTTGGTGATTGTTTGCTCCCTGGTGACAAGTATCCTTATTGGTTATCTTACAAGGATGAAGGACCTTCAGTATTTTTTGAAGTTCCAAATCTTACAGGCTATAGCTTGAGAGGGATGACTTTGTGCATTATATATTCGTCTTTCCTGAACAAAGTAGCATTTGGATATCCAGTTGGTGTTCTGTTAATAAATTTCAGCAAGAGCACCATTCAGCTTTACAAGCGAGAAACACTAACATCCTTTGGGGATGAAGAATGGCAGGACATAACATCAAAGTTAGAACCTGGTGACAAAGTTGAGGTTATTGTAGTTTTTGGGTACAGATTCACTGTAAAGAAGACAGCAATGTATCTGATATATGCTGAATCAATGGAAGAAAACACAGTGCCTACCCAAGAACCTGATAAGAATGTTGTTTCTTCTAGCAGACATGAAATTACAAGGGTCGAGTCTAAGGCATTCCAATGTGATGATGAAGAGGAGGTACCTTTAAGTAGACCCAGAAAAACAACGAAAATGTGCAAGCTTCTTGAACCATAA 2907 0.3963 MSSSRRSSSKSKSKSKYEVNWTNDVFLSFRGEDTRKGFISHLHSSLSHAGIHAFQDEDHESLERGDVIADELHESISSSTISIVVFSINYGGSEWCLGELEKIMECHRTIGQVVLPVFYDVDPSDVRKQRGRFGEAFNRCLLYTSNEKMWRWRHALTAAANLAGFDLKNFRSERLVIKNITDSILRILDSTYLFVADHPVGVDSRVHDMIELLTGPSTKVLIVGIWGMGGMGKSTIAKAVYNEMCHHFEGSSFLENIREVWEQDNGQIYLQQQLLSDILKTEKMKFHSSARGKSLLKEKLCHKKTLVVLDDVNNLDQLNALCGSHEWFGPGSRLIITTRDEHLLNVLKVDSIYRMKDMNTKRSLVTVDMKNRLGMHDLLRDMGREIIRKKSPKELEKRSRLWFYEDAYSVLKKHTGTISIEGLALKLPRNNRVCLSTEAFKEMKKLRLLQLDHVQLEGDFECLSKDLKWLSWRRFPLRYIPGTFHQGSLVAIDLKYSNLYQIWKEPQLLSKLKVLNLSHSFYLIQSPDFSNLPHLEVLILKYCSSLSMVHHSIGDLKNLTLVNLKGCTSLTNLPTTIYKSKSLKVLLLSDCLKIDKLEEDIGQVQSLTTLIANNTAIRQVPYSIVRLKNIGYISVCGFEGLTGDVFPSLIWSWMSPTNNPLSFVQASKSMSSLVSSEAQANSFHDLPSLLTGLSKTRSLQIESFSELQLTQDIERVLDSIYATNGVELETPNASQVSCMETSTSTPCGNQFHISSSENSLRSILIQMGQSSQVTITLSEAISQVLTTNRFGDCLLPGDKYPYWLSYKDEGPSVFFEVPNLTGYSLRGMTLCIIYSSFLNKVAFGYPVGVLLINFSKSTIQLYKRETLTSFGDEEWQDITSKLEPGDKVEVIVVFGYRFTVKKTAMYLIYAESMEENTVPTQEPDKNVVSSSRHEITRVESKAFQCDDEEEVPLSRPRKTTKMCKLLEP 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1796 968 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 165 IPR035897 -
Prci13g1796 968 Gene3D - 17 194 IPR035897 -
Prci13g1796 968 Pfam NB-ARC domain 206 389 IPR002182 GO:0043531
Prci13g1796 968 Gene3D - 195 399 IPR027417 -
Prci13g1796 968 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 190 - -
Prci13g1796 968 Pfam TIR domain 24 185 IPR000157 GO:0007165
Prci13g1796 968 Gene3D Ribonuclease Inhibitor 423 595 IPR032675 -
Prci13g1796 968 Gene3D Ribonuclease Inhibitor 596 720 IPR032675 -
Prci13g1796 968 PRINTS Disease resistance protein signature 299 313 - -
Prci13g1796 968 PRINTS Disease resistance protein signature 222 237 - -
Prci13g1796 968 PRINTS Disease resistance protein signature 530 546 - -
Prci13g1796 968 SMART till_3 22 162 IPR000157 GO:0007165
Prci13g1796 968 ProSiteProfiles TIR domain profile. 21 188 IPR000157 GO:0007165
Prci13g1796 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 366 IPR027417 -
Prci13g1796 968 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 348 IPR044974 GO:0006952
Prci13g1796 968 SUPERFAMILY L domain-like 398 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1796 Prci-Chr13 31889196 31901897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1796 362 627 WRKY Transcription Factor Family AT4G12020 33.333 4.37e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1796 - - vra:106773317 786.563