Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1604 ATGGAGAGGGATGAGAGAATGATGGAGAAAGCGTTGAATAGTGGTGTGGTGGTACGTTACATTGTGAAACCAGCAACAGCAAGTGACTTCAAAGGTATATGGCAGTACACAATACCTTCAATAGTAATGAAAATGAAAGGTAAGAAGAAGCCAACATCTTCATCATCACCACCATTAATAAGAAGCACAAGAGATCAACAAGATGATAATAACATTGAAGATTCTTCATGGACTACTAGCAAAGGACATCATAATTATTATAAAGACATCATCATGTCATCATCATCATCACCACCACCATTGAACAAAATTGTCAAAAGAAAGGAGTTTGTTGTGAGGGCTTCAAAGAATGCTGCTGCTTTTGAAGGCGGCGGCGAGAACAATGGATCATCGTCGTTGTCTGGGGTTATCAAGAAGAGCAAAGTTGTGTGGACAAGCGATCTTCAAAGCCGTTTTTTACAAGCCATAAACATTATTGGGTTAGAAAATGCAGTTCCAAAAAAGATTCTTGAAGTCATGCAAACACCAGGACTGACTAGGGAAAATGTGGCAAGTCACTTGCAGAAATATCGGCTTTTTCTAAAGAGAGTGGCTCGGATGTTTGCGATGCTAATGAACCATGAGACAAACAAGAAGGATGTATTCACAAGTTTGGGATCAAAGTACCCTAATTCACTGATGTTAAAGAACATTAAAGAGGAATTCAGAAGAATGTTAAAGTTCAGAAAACTTAGATCAACTTTTTCTTCTTCATATCCTTATTCCTCATCAGCCAACAAGAACCCTAATTCTTCTCCCTTATTCAAACCAACATCCATGTTTCAGTATCATCATCATTCTAGCTTCCCAAAGTCTCATCATCGTCATTCTACTTTTTCATATTCCACCCCAAAAATGAACGCTTATGAAATGTTACAGGATCAAATAATGCCTGCAAGTACTTCAAGTAATATTCACACCAACAATTTCACTGGCACTGGATCAGGGTTTGCATCAGCTTTTGATGAACAAAGGGATCAGATGATTCAGCCTATTGGATCAAATATTGGTGTTTCAAACACTTATTATGATTCTTGTGGGTATAATATTAATAATGATAATTCCTTCATCAATGGCTCATCAAATTTCGGTTATTTGGTTGATGGAAGGTTAAGTCCCTCTAGCTGTGAGCTTTTTAGGTCAAATCAAAGTATGGCAGATAAAGCGGGAAGCAATAATGACAATATTCTGGAGCAAGAAAATCTGTACGAGGTTTTGAATAATGAAGGAGATCACAGTTATCAAACTATTGAAGTTGAAGGGAATTACAATAATGACGCCTCACTTGTGCCACTAGCTCAGTATTCAAACTTCAGCACTGGATTTGATTACTGTGGTGATATCATCATGGAAGAATTAAATGATAATGGGCAGTTCTCTAATCAGCAGCAAGAAAATCAAGAAGTGGCTGGCAAAGATATTGACCCAAGAGTTGAATCTACCAATGACTATTTTCCATCATTTGACCAAATCTCTGATCAGTTAATGGAAAGCCTGAATTTCTCTGAGAAAGACTTGGAAAATCTCAACCTCGAACAAATTCCCCAGGATTGGGACGATGACTTCCTGGAATCTTTATTCAACAATGGACTCACCCTACCTTCATTTTCAGCCATCAAACCTCCACAAAACTCACACCATTCTTCTCCTCTCCTCAATTTTGTTCCATCCCTCCCATTTTCTCAAGGATCCAAGCTCTTCTTCTTCATCCAAGGTGCTAAGATGTTCGGCTACTATGCTCTTCTTCTAGGGTTCTTGAAGATGATGAAGGTTGGCTAA 1818 0.3828 MERDERMMEKALNSGVVVRYIVKPATASDFKGIWQYTIPSIVMKMKGKKKPTSSSSPPLIRSTRDQQDDNNIEDSSWTTSKGHHNYYKDIIMSSSSSPPPLNKIVKRKEFVVRASKNAAAFEGGGENNGSSSLSGVIKKSKVVWTSDLQSRFLQAINIIGLENAVPKKILEVMQTPGLTRENVASHLQKYRLFLKRVARMFAMLMNHETNKKDVFTSLGSKYPNSLMLKNIKEEFRRMLKFRKLRSTFSSSYPYSSSANKNPNSSPLFKPTSMFQYHHHSSFPKSHHRHSTFSYSTPKMNAYEMLQDQIMPASTSSNIHTNNFTGTGSGFASAFDEQRDQMIQPIGSNIGVSNTYYDSCGYNINNDNSFINGSSNFGYLVDGRLSPSSCELFRSNQSMADKAGSNNDNILEQENLYEVLNNEGDHSYQTIEVEGNYNNDASLVPLAQYSNFSTGFDYCGDIIMEELNDNGQFSNQQQENQEVAGKDIDPRVESTNDYFPSFDQISDQLMESLNFSEKDLENLNLEQIPQDWDDDFLESLFNNGLTLPSFSAIKPPQNSHHSSPLLNFVPSLPFSQGSKLFFFIQGAKMFGYYALLLGFLKMMKVG 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1604 605 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 97 437 IPR044841 GO:0003700|GO:0006355
Prci13g1604 605 NCBIfam myb-like DNA-binding domain, SHAQKYF class 139 193 IPR006447 GO:0003677
Prci13g1604 605 MobiDBLite consensus disorder prediction 49 65 - -
Prci13g1604 605 FunFam Two-component response regulator 136 198 - -
Prci13g1604 605 SUPERFAMILY Homeodomain-like 137 196 IPR009057 -
Prci13g1604 605 Coils Coil 505 525 - -
Prci13g1604 605 Gene3D - 136 198 - -
Prci13g1604 605 Pfam Myb-like DNA-binding domain 142 191 IPR001005 -
Prci13g1604 605 MobiDBLite consensus disorder prediction 45 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1604 Prci-Chr13 25462532 25468544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1604 1 223 Response Regulator Gene Family AT2G27070 34.513 2.47e-22 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci13g1604 Myb_DNA-binding 7.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1604 - K14491 pcin:129289964 1152.89